Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0425 ATGTCGCCGTCGACGGGAAACTGCAGCAAGATCCGCCGCATTGTGCGCCTCCGGCAAATGCTTCTCCGGTGGAGGACGAAGGCGCAGCTAGCGACGCCCGATGTCCCGGCGGGACACGTTACGGTGTGCGTGGGGCCTAGTAAGAGGAGGTTCGTGGTGCGGACGACGTGCCTGAATCACCCGATCTTCCAGAAGCTTCTGGCGCAGGCGGAGGAGGAGTACGGGTTCTGCAACCACGGCCCGCTCGCTATCCCCTGCGATGAGTCGCTTTTCGAAGAGCTTCTTCGGGTCATGACCCGACCCGAACACCGGTTTGAAGATTCTCAGAGACGTTGCCACGTTGATGTCAGAAGTAGTGGCGGAGAATCGTGGCCGTTGCTTAATGACGATCCAGTGTGCTGA 402 0.5995 MSPSTGNCSKIRRIVRLRQMLLRWRTKAQLATPDVPAGHVTVCVGPSKRRFVVRTTCLNHPIFQKLLAQAEEEYGFCNHGPLAIPCDESLFEELLRVMTRPEHRFEDSQRRCHVDVRSSGGESWPLLNDDPVC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0425 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 128 IPR003676 GO:0009733
Lja3g0425 133 PANTHER SMALL AUXIN-UP RNA-RELATED 6 128 - -
Lja3g0425 133 Pfam Auxin responsive protein 17 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0425 Lja-Chr3 4369654 4370352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0425 6 127 Calmodulin-binding Proteins AT4G34750 49.286 7.16e-41 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0425 K14488 - gmx:100795345 192.2