Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0421 ATGGGTTTTCGTTTACCAAGTATTAGAAAAGCACCATTTGCTTTAAACCAAGCATCTTCAAAAGCTGTGGAGAAAATGAAGAGGTTTGTGATCCCCATATCATACTTGAGGCAAACTTCATTCCAAGAGATGCTGAACCAAGCTGAAGAACAATTTGGCTATGACCATCCAATGGGTGGTCTTACAATTCCTTGTGGAGAAGACATTTTCTTAGAAATTACTTCTCAATTGAATAAGTGCTAA 243 0.3745 MGFRLPSIRKAPFALNQASSKAVEKMKRFVIPISYLRQTSFQEMLNQAEEQFGYDHPMGGLTIPCGEDIFLEITSQLNKC* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0421 80 Pfam Auxin responsive protein 24 75 IPR003676 GO:0009733
Lja3g0421 80 PANTHER - 26 78 - -
Lja3g0421 80 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 26 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0421 Lja-Chr3 4310294 4310572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0421 25 70 Calmodulin-binding Proteins AT5G20810 47.826 8.59e-10 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0421 K14488 - gmx:112998524 122.864