Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0420 ATGGGTTTCCGTATACCTGCTATTCGACGGGCATCCTTCGCTGGCCAAGCAGCTTCAAAATCTTTAGAAGTGCCAAAGGGACATGTTGCAGTGTATGTTGGAGAAAAACAAAAGCGGTTTGTGATCCCCATATCATACTTGAACCAACCTTCATTTCAAGATTTGCTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGCGGCCTCACAATTCCTTGCAGCGAAGATCTCTTCCAACACATAACTTCTTGCTTGAATGGGCAATAA 276 0.442 MGFRIPAIRRASFAGQAASKSLEVPKGHVAVYVGEKQKRFVIPISYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLNGQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0420 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lja3g0420 91 Pfam Auxin responsive protein 16 88 IPR003676 GO:0009733
Lja3g0420 91 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0420 Lja-Chr3 4308472 4308747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0420 16 88 Calmodulin-binding Proteins AT5G20810 47.945 3.84e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0420 K14488 - gmx:100816803 161.77