Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0418 ATGGGTTTCCATTTACAAGCTATTCGACGGGCATCATTCACGGCTAGCAAAGCAGCTTCAAAATCTTTTGAAGTACCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTGTGTAGTCCCAATATCCTACTTGAACCAACCTTTATTTCAAGACTTACTAAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGAGAAGATGTTTTCCAACATGTAATTTCTTGCTTGCATGGGAACTAA 279 0.4158 MGFHLQAIRRASFTASKAASKSFEVPKGYLAVYVGEKQKRCVVPISYLNQPLFQDLLNQAEEEFGYDHPMGGLTIPCREDVFQHVISCLHGN* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0418 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Lja3g0418 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Lja3g0418 92 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0418 Lja-Chr3 4305391 4305669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0418 24 91 Calmodulin-binding Proteins AT3G43120 48.529 4.57e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0418 K14488 - gmx:106798972 142.51