Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0416 ATGGGTTTCCGTATACTTGCTATTAGGCGGGCATCCTTCACTGGCCAAGCAGCTTCAAAATCTGCAGAAGTGCCAAAGGGATATCTTGCAGTGTATGTTGGAGATAAAACGAAGCGGTTTGTGATCCCTATATCATACCTGAACCAACCTTCATTTCAAGAGTTACTACATCAAGCCGAAGAAGAATTTGGATATGATCATCCAATAGGTGGTCTCACAATTCCATGCAGGGAGGATGAGTTCCTAAACCTCATTTCTCAGTTGAATGAATGA 273 0.4249 MGFRILAIRRASFTGQAASKSAEVPKGYLAVYVGDKTKRFVIPISYLNQPSFQELLHQAEEEFGYDHPIGGLTIPCREDEFLNLISQLNE* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0416 90 PANTHER AUXIN-INDUCED PROTEIN 10A5 6 89 - -
Lja3g0416 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 89 IPR003676 GO:0009733
Lja3g0416 90 Pfam Auxin responsive protein 13 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0416 Lja-Chr3 4281414 4281686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0416 14 85 Calmodulin-binding Proteins AT3G43120 50.000 4.08e-19 74.7