Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0413 ATGAAGACAGGTAACAGATTTGTGGGGATAGTTCATGCCAAACAGAAACTTCAGAGAACTCTTTCACAGAGAATCAAAATGGCTTCAGCAGTGTCTGGTGTTCCAAAAGGGCACTTAGCAGTGTATGTTGGGCAGGAGCATAAGAGGTTTGTGATTCCAATTTCTTACCTGAGCCACCCTTCATTCAGAGATTTGTTGGATTGGGCTGAAGAAGAATTTGGATTCAATCACCCAATGGGTGGTCTCACAATTCCTTGCAGTGAAGAGTACTTCATCAATCTAACTTCTTCTCTTAATTGA 300 0.4167 MKTGNRFVGIVHAKQKLQRTLSQRIKMASAVSGVPKGHLAVYVGQEHKRFVIPISYLSHPSFRDLLDWAEEEFGFNHPMGGLTIPCSEEYFINLTSSLN* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0413 99 Pfam Auxin responsive protein 23 97 IPR003676 GO:0009733
Lja3g0413 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 98 IPR003676 GO:0009733
Lja3g0413 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0413 Lja-Chr3 4274292 4275022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0413 34 91 Calmodulin-binding Proteins AT5G20810 65.517 8.83e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0413 K14488 - gmx:100781277 189.889