Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0412 ATGGGTATTCGTCTTCCTTTCATGATTGCTCATGCAAAACAGATATTCAAGTTCACGTCACAGCATCATCTCCAAAGTGGGACGAAACAATCCGACGTTCCAAAGGGTCACCTAGCAGTCTATGTTGGAGAGTTGCAGAAGAAGCGTTTTGTGGTTCCAATTTCCTACTTGAACCACCCTTCGTTTCTTGCCTTGCTAAACAGAGCTGAAGAAGAGTTTGGCTTCAATCATCCCATGGGGGGTCTCACTATTCCTTGCAAAGAAGATGCCTTCATCAACCTTACATCTCAACTGCGTGCCTCGTGA 306 0.4542 MGIRLPFMIAHAKQIFKFTSQHHLQSGTKQSDVPKGHLAVYVGELQKKRFVVPISYLNHPSFLALLNRAEEEFGFNHPMGGLTIPCKEDAFINLTSQLRAS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0412 101 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 100 - -
Lja3g0412 101 Pfam Auxin responsive protein 14 96 IPR003676 GO:0009733
Lja3g0412 101 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0412 Lja-Chr3 4238730 4239536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0412 19 91 Calmodulin-binding Proteins AT5G20810 50.685 4.07e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0412 K14488 - cam:101504274 158.688