Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0405 ATGGAGGACGGCGAGCTCGATTTCTCCAACCATGAAGTGTTCTCGAGTCCTAACATTGGCGGCGAGATTCCCAGCAGCGGTTCCATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCACGGTTGCACCCATACCCACACGTGCAACCCTCCTGGACCTGACTTCTCACACACCCATACATGTTATCATGTTCACACCAAGATCGTGCCTGTGACTTCGGAGGATCAGGTGAACAACACTGATGACACTGCTGAGTCTGCTGAGAATGGAAATGGGGATAACAGTGGAAGCAGTGGTAAGAAGGGTAGCAAGAAACGGCCAATTGGGAATAAGGAAGCGGTTCGGAAGTACCGCGAGAAGAAGAAGGCGAGGGCTGCGTCGTTGGAGGATGAGGTTGTTAAGCTGAGGGCTTTGAACCAGCACTTGATGAGGAAGCTGCAGGGGCAGGCTGTGTTGGAGGCCGAGGTTGCGAGGTTGAAGTGTTTGTTGGTTGATATCAGGGGGAGGATTGAAGGGGAGATTGGGTCGTTTCCTTATCAGAAATCGAATAATTCGAACATGGCGGGGGTGAATATGCCCGGTTCTTATGTGATGAACCCTTGCAACTTGCAGTGTGAAGACCGGGTGTATTGCCTTCAATCAGAAGATGGGAGGATTGCTGAAGGCGGTGCGTCGCTGAACGGGGATGGGTTTGGTGGGTGTGAGTTTGAGGGCATCCAGTGTCTTGCAGGGCAGAATCTGGGGCTCAAGGATCTTCGTGGTTGTGGAGGTGGGCAGGCTGTGTCTAATGTCAACTCTGCTCCATCTAATAAAAGAAAAGGGGGATCTCGTGCAGCAACAGCGGGCTGA 852 0.5246 MEDGELDFSNHEVFSSPNIGGEIPSSGSMDSFFDELLKDTHGCTHTHTCNPPGPDFSHTHTCYHVHTKIVPVTSEDQVNNTDDTAESAENGNGDNSGSSGKKGSKKRPIGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMRKLQGQAVLEAEVARLKCLLVDIRGRIEGEIGSFPYQKSNNSNMAGVNMPGSYVMNPCNLQCEDRVYCLQSEDGRIAEGGASLNGDGFGGCEFEGIQCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKGGSRAATAG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0405 283 Coils Coil 112 146 - -
Lja3g0405 283 CDD bZIP 107 158 - -
Lja3g0405 283 MobiDBLite consensus disorder prediction 73 123 - -
Lja3g0405 283 Gene3D - 97 167 - -
Lja3g0405 283 SMART brlzneu 99 166 IPR004827 GO:0003700|GO:0006355
Lja3g0405 283 MobiDBLite consensus disorder prediction 1 31 - -
Lja3g0405 283 MobiDBLite consensus disorder prediction 11 25 - -
Lja3g0405 283 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 253 - -
Lja3g0405 283 MobiDBLite consensus disorder prediction 73 99 - -
Lja3g0405 283 PANTHER BASIC LEUCINE ZIPPER 23 1 253 - -
Lja3g0405 283 SUPERFAMILY Leucine zipper domain 106 148 IPR046347 GO:0003700|GO:0006355
Lja3g0405 283 Pfam Basic region leucine zipper 104 154 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0405 Lja-Chr3 4164584 4167695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0405 1 282 bZIP Transcription Factor Family AT4G35040 60.424 5.69e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g0405 bZIP_2 3.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0405 K25785 - gmx:778149 407.912