Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0391 ATGGGTAGTAACCTTCTTTTCTTCTTCTTCATTCTACTTTCCCAGAACTTCAATGCTTCTTCTGCGGATGAAGTTGAAGCAGCATCTTCAAAAACCTTCATCTTCCGTGTAGATTCCACATCGAAACCCTCAATTTTCCCTACCCATTACCACTGGTACACTTCTGAGTTCACTCAACACACCCAAATCCTCCATCTATACGACACCGTTTTCCATGGCTTCTCCGCCGTGCTCACGCAGAACCAAGCCGACACCATCAGCCACCACCCTTCTGTCCTCGCTGTTTTCGAGGACCGTCGCCGCCACCTCCACACCACGCGCTCCCCTCAGTTCCTCGGCCTCCGCAACCAGCAGGGTCTCTGGTCTGAATCCGACTATGGCTCCGATGTCATCATCGGTATCTTCGACACCGGAGTCTGGCCTGAACGCCGGAGCTTCTCCGATTTGAATCTCGGCCCCATCCCTCGCCGGTGGAAAGGGGTTTGTGAAACCGGAGTCAGATTCTCACCCAGAAACTGTAACCGCAAGTTGGTTGGAGCGAGATACTTCTCCAAAGGACACGAGGCTGGTGCTAGTTCAATGAACCCCATCAATGAAACCGTTGAATTCCGATCCCCTCGTGACGCCGATGGCCACGGCACCCACACTGCCTCCACCGCCGCCGGTCGCTACTCCTTCAAAGCAAGCATGTCTGGTTACGCTTCCGGGATCGCCAAGGGCGTCGCTCCCAAAGCGCGGTTGGCGGTTTACAAGGTTTGCTGGAAGAGTTCCGGTTGCTTCGATTCAGACATCCTCGCCGCCTTTGACGCCGCCGTTAACGACGGCGTGGACGTCATTTCCATATCCATCGGCGGCGGTGACGGTATTGCATCCCCCTACTACCTGGACCCCATCGCAATCGGATCCTACGGCGCTGTTTCCAGAGGAGTGTTTGTCTCTTCCTCCGCCGGCAACGACGGTCCAAGCGGCATGTCAGTGACCAACCTCGCTCCATGGTTGACGACGGTGGGAGCAGGCACAATCGATCGGGATTTCCCTTCACAGGTGGTTCTCGGCGATGGTCGGAGACTCTCCGGCGTGTCTCTCTACGCCGGTCCAGCGTTGAACGGGAAAATGTACCAATTAGTCTATCCTGGGAAATCAGGGGTGTTGGGAGATTCACTCTGCATGGAAAGCTCTCTCGATCCGAAGCAGGTGATGGGGAAAATCGTGGTCTGCGATAGAGGAAGCAGCCCTAGGGTTGCGAAGGGGCTGGTAGTGAAGAAAGCCGGCGGCATCGGAATGATTCTGGCGAATGGAATCTCCAACGGTGAAGGACTCGTCGGAGATGCTCATCTTCTTCCAGCATGCGCCGTTGGATCCAACGAAGGAGATGCAATCAAAGCCTACATCTCTTCTTCCACAAACCCAACCGCCACGATCGATTTCAAGGGAACGATCCTCGGAATCAAACCGGCGCCGGTTCTCGCTTCTTTCTCCGCCAGAGGACCAAACGGTTTAAACCCTCAGATTCTCAAACCGGATCTAATCGCTCCCGGAGTCAACATCCTCGCGGCGTGGACCGACGCCGTCGGTCCAACCGGTCTGGATTCCGATTCACGGAGAACCGAGTTCAATATTTTGTCCGGGACCTCCATGGCTTGCCCTCATATAAGCGGCGCCGCGGCGTTGCTGAAATCAGCACATCCAGATTGGAGCCCCGCCGCCGTGAGATCCGCCATGATGACCACCGCAACTGTTCTCGACAACCGGAAACAGATCCTGACCGATGAAGCCACCGGGAACAGTTCCACTCCCTACGATTTCGGTGCGGGTCATGTCAATTTGGGTCTTGCAATGGATCCTGGGTTGGTCTATGATATCACTGGTGCTGATTATGTAAACTTCTTGTGTGGAATCGGTTACGGGCCGAGGGTTATTCAGGTAATTACACGTGCTCCGGTGAGTTGTCCGGCGAGGAAGCCGTCGCCGGAGAATCTGAATTACCCGTCGTTTGTGGCTATGTTTCCGGTGGGGTCGAAGGGTTTGACGACGAAGACGTTTATAAGAACCGTGACAAACGTGGGGCCCGCGAACTCGGTTTATAGAGTGAGTGTGGAGTCGCAGATGAAGGGGGTGACGGTGACGGTGAAGCCGTCGCGGCTTGTGTTCTCTGAGGCGGTGAAGAAGCGGAGTTATGTGGTGACGGTGGCGGCGGAGACCCGATTCCTGAAGATGGGTCCTTCTGGGGCGGTATTCGGGTCGCTTACGTGGACGGATGGGAAGCACGTGGTTCGGAGCCCCATTGTGGTTACTCAAATAGAACCATTGTAG 2313 0.553 MGSNLLFFFFILLSQNFNASSADEVEAASSKTFIFRVDSTSKPSIFPTHYHWYTSEFTQHTQILHLYDTVFHGFSAVLTQNQADTISHHPSVLAVFEDRRRHLHTTRSPQFLGLRNQQGLWSESDYGSDVIIGIFDTGVWPERRSFSDLNLGPIPRRWKGVCETGVRFSPRNCNRKLVGARYFSKGHEAGASSMNPINETVEFRSPRDADGHGTHTASTAAGRYSFKASMSGYASGIAKGVAPKARLAVYKVCWKSSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPSQVVLGDGRRLSGVSLYAGPALNGKMYQLVYPGKSGVLGDSLCMESSLDPKQVMGKIVVCDRGSSPRVAKGLVVKKAGGIGMILANGISNGEGLVGDAHLLPACAVGSNEGDAIKAYISSSTNPTATIDFKGTILGIKPAPVLASFSARGPNGLNPQILKPDLIAPGVNILAAWTDAVGPTGLDSDSRRTEFNILSGTSMACPHISGAAALLKSAHPDWSPAAVRSAMMTTATVLDNRKQILTDEATGNSSTPYDFGAGHVNLGLAMDPGLVYDITGADYVNFLCGIGYGPRVIQVITRAPVSCPARKPSPENLNYPSFVAMFPVGSKGLTTKTFIRTVTNVGPANSVYRVSVESQMKGVTVTVKPSRLVFSEAVKKRSYVVTVAAETRFLKMGPSGAVFGSLTWTDGKHVVRSPIVVTQIEPL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0391 770 Gene3D - 630 767 - -
Lja3g0391 770 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Lja3g0391 770 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Lja3g0391 770 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Lja3g0391 770 PANTHER XYLEM SERINE PROTEINASE 1 22 764 - -
Lja3g0391 770 Pfam Fibronectin type-III domain 659 764 IPR041469 -
Lja3g0391 770 SUPERFAMILY PA domain 382 467 IPR046450 -
Lja3g0391 770 SUPERFAMILY Protease propeptides/inhibitors 38 103 - -
Lja3g0391 770 Gene3D - 342 481 - -
Lja3g0391 770 Pfam PA domain 374 460 IPR003137 -
Lja3g0391 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 764 IPR045051 -
Lja3g0391 770 Pfam Peptidase inhibitor I9 46 104 IPR010259 -
Lja3g0391 770 CDD PA_subtilisin_like 349 474 - -
Lja3g0391 770 Gene3D Peptidase S8/S53 domain 129 626 IPR036852 GO:0004252|GO:0006508
Lja3g0391 770 ProSiteProfiles Serine proteases, subtilase domain profile. 100 613 - -
Lja3g0391 770 CDD Peptidases_S8_3 102 579 IPR034197 -
Lja3g0391 770 Pfam Subtilase family 127 586 IPR000209 GO:0006508|GO:0008236
Lja3g0391 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Lja3g0391 770 SUPERFAMILY Subtilisin-like 103 617 IPR036852 GO:0004252|GO:0006508
Lja3g0391 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 104 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0391 Lja-Chr3 4007303 4010046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0391 5 770 Subtilisin-like Serine Gene Family AT4G34980 75.000 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0391 - - gmx:100817537 1359.74