Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0386 ATGGGCGCCACTGAGTTCTCCGTCTCCACCGCCGGCAAATGGCTCGGCCTCGTCTCCGCCATCTGGATCCAATCCATCTCCGGCAACAACTACACCTTCTCCAACTACTCCCACGCCCTCAAATCCCTCATGCACCTCACCCAGCTCCAGCTCAACAACCTCTCCGTCGCTAAAGACGTCGGTAAAGCCTTCGGTCTCCTCGCCGGCCTCTCCTCCGACTTCCTCCCCACTTGGGCCATCCTCCTCATCGGCTCCGTCGAAGGCCTCATCGGTTACGGCGTCCAGTGGCTCGTCGTTGGCCAATTCATCAACCCTCTCCCCTACTGGCAGATGTGTGTGTTTCTTTGTTTGGGAGGCAATAGCACAACATGGATGAACACTGCGGTGTTGGTTACCTCCATACGCAACTTCCGCCGAAACAGAGGACCAGTTTCCGGGATTCTGAAGGGGTTTGTAGGGTTGAGCACTGCTATATTCACCAACCTCTGTTCCGCTCTGTTCGCCGACGATCCTGCTTCTTTTCTCCTTATGCTCGCTCTGATTCCGTTCGCCGTTTGCATCGCCGGCGTGTTTTTCCTCCGGGAGGTTCCTCCGGCGAAGACTGTAACAGCCGAGGACGACAGCGAGGAGGCTAGCTACTTCGGCGTTTGTAACGCTGTTGCCGTCGTTGTCGCCGTTTACCTCCTGGCCTACGGTTTTGTCCCCAGTCCTAGCTCCTTGGTGTCGCGAGTGTTCGTGGCGGTTTTGCTGGTTCTGTTGGCTTCGCCGGTGGGGATTCCGGTCTACTCTTACTTCAAAGGAAGGAAATCGAAATCGAACCGGGATGTTGAGGGGCAGCGGGTGACCGAACCGTTGCTGATTCAGAGTGACGACAAGGAGAACGGGGCGGTGACGGTGGCGGCGGAAGAGGAAGTGGTGGTGGTGAAGGGGCGGCCGGCGGTGGGGGAGGAGCACACGATATGGGAGGCGATGAGGAGTGTGGATTTTTGGATCTTGTTCACGTCGTTTCTATGCGGCGTGGGAACCGGGTTGGCCGTGATGAACAATATGGGTCAAATCGGGTTGGCTCTCGGGTACACCGACGTGTCACTCTTTGTCTCATTGACCAGCATTTGGGGATTTTTTGGACGGATCATATCGGGTTCGGTTTCGGAGCTCTTCATCAAGAAAGCTGCAACGCCTAGACCTCTTTGGAATGCAGCATCACAGATTCTGATGGCTGTGGGTTACATACTCCTAGCCATGGCTTTGCCGGGTTCACTTTACATTGGCTCTATCGTAGTCGGCATATGTTACGGGGTGCGGCTAGCTATTACCGTCCCAACGGCCTCCGAGTTATTTGGACTCAAATATTATGGTCTCATCTACAACATTCTCATCCTCAACCTTCCATTGGGTTCTTTCCTCTTTTCCGGGCTGCTTGCTGGCATACTGTATGATAGGGAGGCAACTGCAACAGAAGGAGGAGGCAACACATGTGTTGGAGGTCATTGCTACAGGTTAGTCTTTATAGTAATGGCTGCAGCATGCATTGTTGGGTTCTTCTTGGACATTCTATTGTCAATCAGAACCAAGAATGTCTACAACAAGATTTCCATGAGCAAGAAATCCAAGAAATCTTTGGGGACATCAAGTAGCCAATGA 1644 0.5353 MGATEFSVSTAGKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLSSDFLPTWAILLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLVTSIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLALIPFAVCIAGVFFLREVPPAKTVTAEDDSEEASYFGVCNAVAVVVAVYLLAYGFVPSPSSLVSRVFVAVLLVLLASPVGIPVYSYFKGRKSKSNRDVEGQRVTEPLLIQSDDKENGAVTVAAEEEVVVVKGRPAVGEEHTIWEAMRSVDFWILFTSFLCGVGTGLAVMNNMGQIGLALGYTDVSLFVSLTSIWGFFGRIISGSVSELFIKKAATPRPLWNAASQILMAVGYILLAMALPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDREATATEGGGNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIRTKNVYNKISMSKKSKKSLGTSSSQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0386 547 Gene3D MFS general substrate transporter like domains 321 527 IPR036259 -
Lja3g0386 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 541 - -
Lja3g0386 547 PANTHER - 7 541 - -
Lja3g0386 547 CDD MFS_Mch1p_like 12 513 - -
Lja3g0386 547 SUPERFAMILY MFS general substrate transporter 38 527 IPR036259 -
Lja3g0386 547 Pfam Nodulin-like 13 261 IPR010658 -
Lja3g0386 547 Gene3D MFS general substrate transporter like domains 12 274 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0386 Lja-Chr3 3961351 3965185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0386 13 543 Nodulin-like Gene Family AT4G34950 69.495 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0386 - - gmx:100807372 793.882