Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0361 ATGAAGAAATCCTCTGTTTCCTCTGTTTCCCCTGTTTCCTATGTTTCCTCTGTTTTCTTCATCTTCTCTATGCTTTTTCTCCTCCTTCTCCAACCTGCTAGATCAGAAAACGGTGATTCCCAAGCACTATTAGCCCTCAAATCCTCCATTGATGTTCACAACAAGCTTCCATGGCGAGAAGGAAGCGATGTGTGCACATGGGTAGGAGTCAGAGATTGTTTCAAAGGAAGAGTGAGTAAGCTTGTGCTGGAGTATTTGAACTTGACCGGAACCTTGGACTCGAAGATCTTGACTCGTTTGGATCAACTCAGAGTCCTCAGCTTCAAAGGGAACTCGCTCTCTGGTCCAATCCCGGATCTCTCTGGCTTGATCAACCTCAAATCCATATACCTCAACGATAACAGCTTCTCCGGCGAGTTTCCTGCTTCAGTTTCGCTTCTCCACCGCGCCAAGGTCATTGTCTTCTCCGGTAACAAAATCTCCGGCGACATTCCGGCGTCGCTGCTCAACCTCCCGAGGCTCTACGTTCTCTACCTGCAAGACAACTTGCTCACCGGAACCATACCGCGTTTCAACCAAGGCGGCCTCAAGTACCTGAACGTCTCCAACAACCGACTCTCCGGCGAGATTCCGGTGACGTCAGCTTTGGCCCAGTTCAACTCGTCGTCATTTTCCGGCAACCCGGGTCTCTGCGGCGAGCAGATCCACCGGAAATGCAAGAGCAGCATCCTGTTCCCGCCGGCGGTGAGCCCTGTTTCTCCGGCGACGACACCAGGAGGAAACACCGCATCAAAATCAAAACCCACCTCGAAATCATCGAACCGGAGGAAGCTGATTAAGATTATCGGAGGAAGCGTTGGTGGGGTGGTTCTGTTACTGATATGCTTGCTTCTTCTGTGCGTGATTTGCAAGAATCGAAGGAAGAGAGTGGTGGGTGCTGTTTCAGCATCAACAAGGAAGAAGAACGGTGGTGACGTGGCGGCGGAGGAACAGGGTGGTGCCGGAGTGAGTGGCGGCGGAGGAGGTAGTAACGAGAGAAAGCAAGGTGGTTTTGCGTGGGAATGTGAGGGTCTAGGGAGATTGGTGTTCTGCGGAGCAGGGGATCGGGAGATGAGTTACAGTTTAGAGGATTTGCTCAAGGCTTCTGCAGAGACATTGGGGAGGGGTATTATGGGAAGTACATATAAAGCGGTGATGGAGTCAGGGTTCATAGTTACTGTGAAGAGGTTGAAGGATGCTAGGTACCCTGAGTTAGAGGAGTTTAGGGCACAAATTGAGGTACTTGGGAGGTTGAGGCACCCTAATTTGGTCCCACTCAGGGCTTACTTTCAGGCAAAGGAGGAACGTCTTCTGGTCTATGATTACTTTCCCAATGGCAGCCTCTTCTCTCTAATTCATGGATCAAAAACATCTGGTGGGGGAAAGCCTCTTCACTGGACATCCTGCCTCAAAATCGCCGAAGATCTCGCAACTGGCCTCCTCTACATTCACCAGAACCCGGGCTTGACTCACGGAAACCTGAAATCTTCCAATGTGTTGTTGGGTTCTGACTTTGAGTCCTGTCTTACAGACTATGGTCTCACAGTGTTTCTTAACCCTGATTCAATGGATGAACCAAGTGCCACTTCTTACTTCTACAGAGCACCCGAGTGTCGCGGCTTTCACGGGTCACAAACTCAACCAGCTGATGTGTACAGCTTCGGGGTCCTTCTCCTTGAGCTCATGACAGGCAAAACACCCTACCAAGACCTCGTTCAAGCACATGGTTCGGATATACCAAGTTGGGTTCGGTCGGTGCGCGAAGAAGAGACCGAATCCGGGGACGATCCTGCTTCTTCAGGGAATGAAGCATCTGAAGAGAAGCTTCAGGCTTTATTGAACATAGCAATGGCCTGTGTTTCACTAGTGCCGGAGAACCGGCCTGCAATGAGAGAAGTTTTGAAGATGATAAGAGATACAAGAGGGGAAGCTCAGGTCTCATCTAACAACAGCAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAGCACTTGAGCATATGA 2064 0.5019 MKKSSVSSVSPVSYVSSVFFIFSMLFLLLLQPARSENGDSQALLALKSSIDVHNKLPWREGSDVCTWVGVRDCFKGRVSKLVLEYLNLTGTLDSKILTRLDQLRVLSFKGNSLSGPIPDLSGLINLKSIYLNDNSFSGEFPASVSLLHRAKVIVFSGNKISGDIPASLLNLPRLYVLYLQDNLLTGTIPRFNQGGLKYLNVSNNRLSGEIPVTSALAQFNSSSFSGNPGLCGEQIHRKCKSSILFPPAVSPVSPATTPGGNTASKSKPTSKSSNRRKLIKIIGGSVGGVVLLLICLLLLCVICKNRRKRVVGAVSASTRKKNGGDVAAEEQGGAGVSGGGGGSNERKQGGFAWECEGLGRLVFCGAGDREMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPELEEFRAQIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSYFYRAPECRGFHGSQTQPADVYSFGVLLLELMTGKTPYQDLVQAHGSDIPSWVRSVREEETESGDDPASSGNEASEEKLQALLNIAMACVSLVPENRPAMREVLKMIRDTRGEAQVSSNNSSDHSPGRWSDTVQSFPREEHLSI* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0361 687 Gene3D Transferase(Phosphotransferase) domain 1 456 675 - -
Lja3g0361 687 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Lja3g0361 687 MobiDBLite consensus disorder prediction 598 618 - -
Lja3g0361 687 MobiDBLite consensus disorder prediction 321 343 - -
Lja3g0361 687 Gene3D Ribonuclease Inhibitor 193 242 IPR032675 -
Lja3g0361 687 MobiDBLite consensus disorder prediction 655 687 - -
Lja3g0361 687 MobiDBLite consensus disorder prediction 654 687 - -
Lja3g0361 687 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Lja3g0361 687 SUPERFAMILY L domain-like 40 232 - -
Lja3g0361 687 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 677 - -
Lja3g0361 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 677 - -
Lja3g0361 687 MobiDBLite consensus disorder prediction 250 271 - -
Lja3g0361 687 Pfam Protein kinase domain 383 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0361 687 ProSiteProfiles Protein kinase domain profile. 380 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0361 687 Gene3D Phosphorylase Kinase; domain 1 365 455 - -
Lja3g0361 687 SUPERFAMILY Protein kinase-like (PK-like) 384 660 IPR011009 -
Lja3g0361 687 MobiDBLite consensus disorder prediction 254 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0361 Lja-Chr3 3691978 3697240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0361 12 687 Receptor kinase-like Gene Family AT1G60630 61.087 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja3g0361 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0361 - - lja:Lj3g3v3500180.1 1241.48