Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g0334 | ATGGCATCTTCTTCCGGAGCTTCTCAAATAAAATGTGCTGTACTGGTTGCATGTATTACTGGTTGCATACTGCTCTACTTTAGAGTCAAGAAGAAGAGACAAATCATCAAGAAAGATATTGTCGTAAAGAGTGTAGAGGGAAATCCAATGTCAAACAACTCTCCTCAAATATATCATGATGTTTTTGTGAGCTTTAGAGGTGAAGACATTCGTCACGGTTTTCTTAGTCATTTGACCAAGGCTTTTATTCAAAAGCAAATACAGGCCTTTGTGGATGATAAACTTAAGAGAGGAGATGATATATCCTCATCACTTTTTGAAGCAATTGAAGGCTCGTCCATTTCATTGATCATATTCTCTGAAAATTATGCTTCTTCACATTGGTGTTTAGAAGAACTTGTGAAAATACTTGAGTGCAAAGAGAAACATGGACAGATTGTAATACCTGTTTTCTACAAGGTAGACCCATCAGATGTACGACATCAAAGGAATAGTTATGAAAGTGCACTTACTGAACATGAAAAGAAGTATAATTTGCACAGGGTTCAAATCTGGAGACAAGCTTTGAACAAATCTGCCAATTTATCAGGAATTAACTCATTAAATTTTCAGAATGATGCCGATCTGCTTGAAGAAGTCATCAATCATGTGTCCACGAGGTTGATGCCTAAGCATCCAATTAACACAAAAGGACTTATTGGAATGGAAAAGCCATCTGCACATTTGGAATCATTGTTATGCCGGGAGTCAAAAGAAGCACGTGTTATTGGAATTTGGGGTATGGGCGGTATTGGCAAGACAACCGTTGCAGAAGAGATATTCAACAAAAAATGTTTTGAGTATGAAAGATCTTGTTTTTTAGAAAAGGTAAATAATGAATTACAAAAAGATGGAATAAGGTCTTTGAAAGAAAAACTTTTATCTACACTATTGGCAGAAAATGTGAAAATTGACACTCCAAATAGGTTGCCTAGTGATATTAAGAGAAGGATTGGTCGTACGAAGGTTCTTATTGTTCTTGATGATGTGAATGATATCGACTTGGTTGAAAGTATATTTGGAACTCTTGATTGGCTTCACGCAGGTAGTATAATAATGATAACCACTAGAGATAAGCAAGTACTTATTTCTAATAAAGCTCATGATATATACCATGTTGAGGAATTGAGTTTTAGTGAAGCACTTCAACTTTTCAATTTGAATGCATTTGACCAAAGTCATCTTGAAAAGGGCTATTATGATCTATCACAAAGGTTGGTCAATTATGCCAAAGGTGTTCCATTGGTTCTTAAAGTCTTGGGTCGTCTTCTTCGTGGAAGAAGTAGGAAAGAATGGGAAAGTCAGCTAGACAAGCTTACAAAAGGGTCAGTTAAAGAAGTCCATGATCTCATGAGACTAAGTTATGATAATCTTGATCGCAGAGAGCAACAAATTCTTTTAGATGTTGCCTGTTTCTTTAATGGTATGAAAATGAAAATGAGAACGTTATTACCGTTATTGAAAGATCATGAAAATGATAATTCTGGGGTTGTTGGTTTAGAAAGGCTAAAAGATAGAGCTCTAGTGACTATTTCTAAGGATAATACTGTGTCTATGCATGACATTATACAAGAAATGGGCCGGGAGATTGTTCGCCAAGAATCTAAGGACCCTGGACAACGGAGTCGACTATGGGATCACAACGACATTTATGAAGTATTCAAATATAACAAGGGGACTGAGGCTATTAGAAGCATATGGGGAAACTTTTCAGAAATTAGGAATCTGGATTTAAGCCCTGACGTATTTGTTAAGATGAGCAAACTCCAATTTTTGTGTATTTATGAGGAAGGTGGTACAAAGTGTCGGGATCTTTTTTCTCAGTGCAGGGGTCTTTTGCTTAGTCTAAAATATTTGATATGGACTGGTTGCTCATCATGGCCACAGTGTTTTTCTCCCGAAAGTCTTGTTATATTGGTGTTATACGAAGGCAAGATGCAAAGACTTTGGCACGGAGTACAGAATTTGGTTAATTTGAAAGCAGTTTTCGTCGAAAGATGCTCTTTCTTAGAGGAGCTTCCGGACTTTTCAAAAGCCATAAATCTCGAGTTTCTATCTCTCTGTGATTGTGTGAAATTGAAGAGTGTCCATCCATCTATTTACTCTCTCGACATGCTTCTGATACTCAATCTAGAGGGGTGCAAGTCCTTGACCGAATTTACAAGTGATACCCGTTTAAGCTCCCTATTGTCTCTCAACCTTACAAGTTGCACAAGTCTAAGGAAGTTGTCATTGACATCAGAGAATATAACACACCTATATTTGGAAGGAATTCCTGCCAATGTATTGCCTTCATCGTTTGCATGTCAAAGCAAGCTAGGAAAGCTGGTATTACGGGGAACTGAATATGAGAGGTTACCTGCATGCATCACGAATCTTACAAGATTGCTATACCTTGACCTAACTTCTTGTGCTAAACTTCAGTCAATACCAGTGCTTCCCCCGTCCCTTGAAGTTTTATTTGCTGGTGGGTGCAGATCACTGAAGACAATATTCTTTCCTTCAACTGCTGCAGAACAGTTCAAGGAAAACAAGAAATTTGTTTTCTTCGATAATTGCTGGAACTTGGATGAACGTTCACTCTGGGGTATTGAGTTGAATGCACAAATCAACTTGATGAAACTTACATATCAACATCCATTCGCACCAGTGTATGATGATCAAGTTGACAAATATGAGAATGGTTTTGTTCGAGCAATATACGAGTATCCAGGATGCATTGTTCCAAAGTGGATGGAGTACAAGACAACAAAGGGTGACATGATTATTGATCTTGGTCGTGCTCCTTTGCTGGGTTTCATTTTTTGTTTCATCCTGGCTGCGGAGGAGGACCCAACAGAAGTTCGTGGGGAAGTTAAATTTGAGATCACTATAATTGATGGTGAGGGTGAAAAGGGTTGTGTCATGATTTCATGGATTTCAACGGATAATGTTTTCTTGATATATGACAAAAAATGTTCCGACAACATAATTAGCGCAACCAATAATCAGACAAGGTTTAAAATCAAGGTTGCAATACTGGAAGTAAGATCCATAGCTGGTCGAGTGATGAATTGGAAGATCAAAGAGTTTGGAGTCAGCCCCATAAACACCTTGATATATGATAGTTTCAGGCACATCGCAAGGAACTGTGAATGTGATGCAGCGGAGGCGTCGGCTGTTGTGCATGAGCAAGCACGTGAAAACCCTGGTGAGCCAGCCGCCACAGAGGGAAGGATGGGTTACGGCTCCACTAATCGCGGCATAGAGCATGCAACTCGTGGAAAAGAGAGTGAAGAAGGCATTGATGGATGGACCACAGTCAAGGGAAAGAAACCAGGGCCAGGAAAGATTGTTGAGGAAAAAAAGGGCATTGTGATTAATGAAGGCCACGCAGGCCCTTTCAGTGCAATCACCAGCGAGCCCCCTCCTCACACACCGCTTGGAAATTCTTCTGCACCAGAATTGGAGGATGGGGAGGTTGCTGTTGATGACCCCCCGGATGCACAACAGCAATAA | 3537 | 0.3944 | MASSSGASQIKCAVLVACITGCILLYFRVKKKRQIIKKDIVVKSVEGNPMSNNSPQIYHDVFVSFRGEDIRHGFLSHLTKAFIQKQIQAFVDDKLKRGDDISSSLFEAIEGSSISLIIFSENYASSHWCLEELVKILECKEKHGQIVIPVFYKVDPSDVRHQRNSYESALTEHEKKYNLHRVQIWRQALNKSANLSGINSLNFQNDADLLEEVINHVSTRLMPKHPINTKGLIGMEKPSAHLESLLCRESKEARVIGIWGMGGIGKTTVAEEIFNKKCFEYERSCFLEKVNNELQKDGIRSLKEKLLSTLLAENVKIDTPNRLPSDIKRRIGRTKVLIVLDDVNDIDLVESIFGTLDWLHAGSIIMITTRDKQVLISNKAHDIYHVEELSFSEALQLFNLNAFDQSHLEKGYYDLSQRLVNYAKGVPLVLKVLGRLLRGRSRKEWESQLDKLTKGSVKEVHDLMRLSYDNLDRREQQILLDVACFFNGMKMKMRTLLPLLKDHENDNSGVVGLERLKDRALVTISKDNTVSMHDIIQEMGREIVRQESKDPGQRSRLWDHNDIYEVFKYNKGTEAIRSIWGNFSEIRNLDLSPDVFVKMSKLQFLCIYEEGGTKCRDLFSQCRGLLLSLKYLIWTGCSSWPQCFSPESLVILVLYEGKMQRLWHGVQNLVNLKAVFVERCSFLEELPDFSKAINLEFLSLCDCVKLKSVHPSIYSLDMLLILNLEGCKSLTEFTSDTRLSSLLSLNLTSCTSLRKLSLTSENITHLYLEGIPANVLPSSFACQSKLGKLVLRGTEYERLPACITNLTRLLYLDLTSCAKLQSIPVLPPSLEVLFAGGCRSLKTIFFPSTAAEQFKENKKFVFFDNCWNLDERSLWGIELNAQINLMKLTYQHPFAPVYDDQVDKYENGFVRAIYEYPGCIVPKWMEYKTTKGDMIIDLGRAPLLGFIFCFILAAEEDPTEVRGEVKFEITIIDGEGEKGCVMISWISTDNVFLIYDKKCSDNIISATNNQTRFKIKVAILEVRSIAGRVMNWKIKEFGVSPINTLIYDSFRHIARNCECDAAEASAVVHEQARENPGEPAATEGRMGYGSTNRGIEHATRGKESEEGIDGWTTVKGKKPGPGKIVEEKKGIVINEGHAGPFSAITSEPPPHTPLGNSSAPELEDGEVAVDDPPDAQQQ* | 1179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g0334 | 1178 | ProSiteProfiles | TIR domain profile. | 57 | 221 | IPR000157 | GO:0007165 | |
Lja3g0334 | 1178 | SUPERFAMILY | L domain-like | 532 | 869 | - | - | |
Lja3g0334 | 1178 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 59 | 1053 | - | - | |
Lja3g0334 | 1178 | Pfam | TIR domain | 59 | 228 | IPR000157 | GO:0007165 | |
Lja3g0334 | 1178 | MobiDBLite | consensus disorder prediction | 1072 | 1178 | - | - | |
Lja3g0334 | 1178 | SMART | till_3 | 58 | 195 | IPR000157 | GO:0007165 | |
Lja3g0334 | 1178 | Gene3D | - | 58 | 221 | IPR035897 | - | |
Lja3g0334 | 1178 | Gene3D | - | 388 | 472 | IPR042197 | - | |
Lja3g0334 | 1178 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 59 | 1053 | IPR044974 | GO:0006952 | |
Lja3g0334 | 1178 | Pfam | NB-ARC domain | 245 | 469 | IPR002182 | GO:0043531 | |
Lja3g0334 | 1178 | Gene3D | - | 222 | 384 | IPR027417 | - | |
Lja3g0334 | 1178 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 218 | 481 | IPR027417 | - | |
Lja3g0334 | 1178 | MobiDBLite | consensus disorder prediction | 1096 | 1112 | - | - | |
Lja3g0334 | 1178 | Gene3D | Ribonuclease Inhibitor | 737 | 874 | IPR032675 | - | |
Lja3g0334 | 1178 | Gene3D | Ribonuclease Inhibitor | 559 | 736 | IPR032675 | - | |
Lja3g0334 | 1178 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 54 | 197 | IPR035897 | - | |
Lja3g0334 | 1178 | PRINTS | Disease resistance protein signature | 255 | 270 | - | - | |
Lja3g0334 | 1178 | PRINTS | Disease resistance protein signature | 804 | 820 | - | - | |
Lja3g0334 | 1178 | PRINTS | Disease resistance protein signature | 423 | 437 | - | - | |
Lja3g0334 | 1178 | PRINTS | Disease resistance protein signature | 330 | 344 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g0334 | Lja-Chr3 | 3462799 | 3476112 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g0334 | 43 | 824 | WRKY Transcription Factor Family | AT4G12020 | 32.668 | 8.86e-93 | 326 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g0334 | - | - | lja:Lj0g3v0213739.1 | 2209.88 |