Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0329 ATGTCGCGCCAGTCGACGTCGTCTGCGTTCACCAAATCGAAGACGCTCGATAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTGTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTTAACATCATTATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCCTTAAAGACAAAGAGTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTGCACGAGCAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGGTCTTGCCAAACTTGCTGATTTTGGTGTGGCTACAAAATTAACAGAGGCTGATATTAATACTCATTCAGTTGTTGGAACACCATACTGGATGGCCCCAGAGGTTATAGAAATGTCCGGGGTTTGCGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTTCCTCCTTACTATGACTTGCAGCCTATGCCAGCTCTTTTCCGAATTGTACAGGATGAGCAACCTCCAATTCCGGATAGCCTTTCACCTAACATTACTGACTTTCTGCATCAGTGCTTTAAGAAGGATGCAAGACAAAGGCCTGATGCGAAAACGCTGCTGTCTCACCCCTGGATCCTAAACTGTAGACGTGTCCTGCAGTCTTCTCTTCGTCATAGCGGAACATTAAGTCCATAA 882 0.424 MSRQSTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLAKLADFGVATKLTEADINTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLSPNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLSP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0329 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lja3g0329 293 Gene3D Transferase(Phosphotransferase) domain 1 17 289 - -
Lja3g0329 293 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0329 293 SUPERFAMILY Protein kinase-like (PK-like) 17 281 IPR011009 -
Lja3g0329 293 PANTHER MAP3K EPSILON PROTEIN KINASE 1 6 290 - -
Lja3g0329 293 CDD STKc_Cdc7_like 19 274 - -
Lja3g0329 293 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0329 293 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Lja3g0329 293 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lja3g0329 293 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Lja3g0329 293 PRINTS Tyrosine kinase catalytic domain signature 181 191 IPR001245 GO:0004672|GO:0006468
Lja3g0329 293 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Lja3g0329 293 PIRSF ILK 2 272 - -
Lja3g0329 293 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0329 293 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 290 - -
Lja3g0329 293 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0329 Lja-Chr3 3386170 3391829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0329 1 291 MAP Kinase Kinase Kinase AT3G13530 93.127 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lja3g0329 Pkinase 8.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0329 - - gmx:100813256 569.311