Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0327 ATGTCGCGCCAGTCGACGTCGTCTGCGTTCACCAAATCGAAGACGCTCGATAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTGTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTTAACATCATTATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCCTTAAAGACAAAGAGTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTGGTTGCTGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTGCACGAGCAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTGGCAACAAAATTAACAGAGGCTGATATTAATACCCATTCAGTTGTTGGAACACCATACTGGATGGCCCCAGAGGTTATAGAAATGTCCGGGGTTTGCGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTTCCTCCTTACTATGACTTGCAGCCTATGCCAGCTCTTTTCCGAATTGTACAGGATGAGCAACCTCCAATTCCTGATAGCCTTTCACCTAACATTACTGACTTTCTGCATCAGTGCTTTAAGAAGGATGCAAGACAAAGGCCTGATGCGAAAACGCTGCTGTCTCACCCCTGGATCCTAAACTGTAGACGTGTCCTGCAGTCTTCTCTTCGTCATAGCGGAACATTAAGAACTATAAAGGATGATGGTTCTGCAGTTGCAGAAGTTTCTGGTGGCGACCATAAGAGCACTGGTGAAGGATCTTCTGTGGAGAAAGAGGACTCTGCAAAAGAGTTTTCAACTGGGGAAGCTAATAGCAGGAAATCTCATGAAGACAACGCTTCAGATTCTAATTTTTCCAACGAGAGAACAGAGAAGGAAGATGATATTCCATCAGATCAGGTTCTTACTTTAGCCATTCGTGAGAAGTCATTTCTACGAACTGGTTCTGGCAATCTCTCTTCTAGTATAGAAGTGGTTAGTGCTGAGCCAACTGGCACTGAAACTTCAAATGCTAAAGACCTTCATGAAGTCATAATGAATGGAGAAGTTGAATCTCCACAATCAAGAGGAAAGGCTAATATGGCTGTAGGAAAAGACAGTTCTATCAATAATCGCACTAAACCATTTGCTTTTGAACCAAGAGGACAAGATAGTGGTTCCCTAAAGGCAATGAAGATACCGCCCCCTGTGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCTCCAGGAGATGCCTACTTAGATGACTTATTTCATCCATCAGATAAGCAATCTGGGGAGGTTGTGGCTGAGGCATCCACATCTACATCTACTTCACATATAGCTAAAGGTAATGTATCTATGAATGATGGTGGGAAGAATGACCTTGCCAAAGAGTTGAGGGCTACAATTGCTCGAAAGCAATGGGAGAAGGAGAGTGAAATTGGGCAGGAAAACAATGGTGGGAACCTTTTACACCGAGTGATGATAGGTGTTCTAAAAGACGATGTTATTGATATAGATGGTTTGGTCTTTGATGACAAACTTCCTGGAGAAAACCTTTTTCCTCTACAGGCCGTTGAGTTCAGCAAATTAGTTGGTTCTTTAAGAACAGAAGAATCAGAAGACGTGATTGTCTCTGCTTGTCAGAAACTTATTGGTATATTTCATCAACGCCCAGAGCAGAAGATTGTATTTGTTACCCAGCATGGTTTACTTCCTTTGACTGACTTGCTAGAAGTTCCTAAAACGCGCGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAGTTAAAGACAACACTGATTTTCAAGAAAATGCATGTCTTGTTGGATTGATTCCGGCAGTCATGAGCTTTGCAGTATCTGATCGTCCTCGAGAGATTCGTATGGAAGCGGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTTATAGCTTGCCGTGGGATACCTGTTTTGGTGGGATTTCTTGAGGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTGTTTAAACTTCAGCAGACAACGCCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAATGGGATACTCCTTAGGCTTATAAATACCCTTTATAGCTTAAATGAGTCAACTCGATTAGCTTCTATGTCTGCTGGGGGTGGATTTCTGGCTGATGGTTCGGCTCAACGGCCACGTTCTGGTATCTTGGATCCTGCACACCCTTTTATGAATCAGAACGATGCACAGCTATCTTCAGCAGATCAGCAAGATCTCTCTAAAGTGAGGCGTGGTGTGCTGGATCATCACTTAGAGCCTATGCATGCTTCGTCTTCCAATCCTCGAAGATCAGATGCTAACTACCCAACGGATGTTGATAGACCTCAATCGAGCAATGCAGCAGCTGAAGCTGTGTCACTGGGGAAGAGTTTGAATCTCACTTCGAGGGAATCTTCAGTAGTTGCATTGAAAGAGCGAGAGAATGTGGATCGTTGGAAAACTGATCCTTCTCGGGCTGAAGTTGAACCCAGACAGCAGCGTAGTAGTATTTCTGCTAACAGGACATCAACAGATAGGCCTCCAAAATTGGCAGAACCTTCTTCGAATGGGCTATCAATGACAGGAGCTACACAGCAAGAACAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCTCCATCTGGACGCTTTTCAGGACAGCTTGAGTATGTCCGTCAGTTTTCAGGATTAGAGAGACATGAAAGTGTACTCCCTTTGTTACATGCCACTGAAAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGGAGGGAAAATGGAAATCTTGACTCCAGTGCTAGAGTGTCTCACAAAGTTGCTCCCAAGAAACTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCTACATCTGGGATTGTATCTCAGACAGCATCAGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGGCTACTTTCCCACATGGTTTCATCATTGAATGCAGATGTTGCAAGAGAGTACCTGGAAAAAGTGGCAGATCTTCTGCTTGAATTTGCACAAGCTGACACAACAGTGAAGTCGTACATGTGTAGCCAAAGTTTGCTTAGTCGTCTTTTCCAGATGTTCAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATCAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCCATTAAACACTTGATACCAAATCTTGAACTCAAAGAAGGGACTCTTGTATCAGAGATACATCATGAAGTTCTGAACGCACTGTTCAATTTATGCAAGATAAATAAGAGAAGACAGGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTCATCACATCAAATTCTCCCCTGAAACAATATGCGTTGCCTCTGCTATGTGACATGGCTCATGCATCTCGCAACTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGAACTTTGGTCTGTGACAGCACTAGATTCAATTGCTGTTTGCTTAGCCCATGACAATGACAACAGGAAGGTTGAACAATCATTGCTGAAAAAGGACGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGAGCTGTCCTGAGCAACATTTTGTACACATATTGGAGCCATTTTTGAAAATCATCACAAAATCTTCCCGGATCAATACCACATTGGCTGTTAACGGATTAACACCATTGCTCATTGCAAGGCTTGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAGCATCATCCGCAGCCCAAGAAGCTGATTGTGGAGAACGATCTTCCTGAGAAACTTCAAAACTTAATAGGGGAACGGAGAGATGGACAAGTGTTGGTGAAACAGATGGCTACTTCATTGCTTAAAGCTCTACACATCAACACCGTATTGTAA 4221 0.4243 MSRQSTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADINTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLSPNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLRTIKDDGSAVAEVSGGDHKSTGEGSSVEKEDSAKEFSTGEANSRKSHEDNASDSNFSNERTEKEDDIPSDQVLTLAIREKSFLRTGSGNLSSSIEVVSAEPTGTETSNAKDLHEVIMNGEVESPQSRGKANMAVGKDSSINNRTKPFAFEPRGQDSGSLKAMKIPPPVEGNELSRFSDPPGDAYLDDLFHPSDKQSGEVVAEASTSTSTSHIAKGNVSMNDGGKNDLAKELRATIARKQWEKESEIGQENNGGNLLHRVMIGVLKDDVIDIDGLVFDDKLPGENLFPLQAVEFSKLVGSLRTEESEDVIVSACQKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFQENACLVGLIPAVMSFAVSDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQTTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSAGGGFLADGSAQRPRSGILDPAHPFMNQNDAQLSSADQQDLSKVRRGVLDHHLEPMHASSSNPRRSDANYPTDVDRPQSSNAAAEAVSLGKSLNLTSRESSVVALKERENVDRWKTDPSRAEVEPRQQRSSISANRTSTDRPPKLAEPSSNGLSMTGATQQEQVRPLLSLLEKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHATEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKVAPKKLGTFGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKHLIPNLELKEGTLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQSLLKKDAVQKLVKFFQSCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0327 1406 Gene3D - 1060 1404 IPR011989 -
Lja3g0327 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lja3g0327 1406 MobiDBLite consensus disorder prediction 495 515 - -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 313 360 - -
Lja3g0327 1406 SUPERFAMILY ARM repeat 585 781 IPR016024 -
Lja3g0327 1406 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0327 1406 SUPERFAMILY ARM repeat 1072 1399 IPR016024 -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 893 942 - -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 798 821 - -
Lja3g0327 1406 Gene3D - 575 800 IPR011989 -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 834 867 - -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 907 942 - -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 298 361 - -
Lja3g0327 1406 CDD STKc_Cdc7_like 19 274 - -
Lja3g0327 1406 MobiDBLite consensus disorder prediction 413 451 - -
Lja3g0327 1406 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1365 - -
Lja3g0327 1406 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Lja3g0327 1406 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Lja3g0327 1406 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lja3g0327 1406 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Lja3g0327 1406 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0327 1406 Gene3D Transferase(Phosphotransferase) domain 1 17 303 - -
Lja3g0327 1406 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Lja3g0327 1406 PANTHER MAP KINASE KINASE KINASE 2 1365 - -
Lja3g0327 1406 SMART arm_5 1191 1230 IPR000225 GO:0005515
Lja3g0327 1406 SMART arm_5 614 654 IPR000225 GO:0005515
Lja3g0327 1406 SMART arm_5 1145 1189 IPR000225 GO:0005515
Lja3g0327 1406 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0327 1406 MobiDBLite consensus disorder prediction 841 867 - -
Lja3g0327 1406 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0327 Lja-Chr3 3356172 3377586 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0327 1 1406 MAP Kinase Kinase Kinase AT3G13530 71.938 0.0 1995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lja3g0327 Pkinase 7.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0327 - - aprc:113864564 2450.24