Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0319 ATGGGTTATAGAATTTCAAGAATCATAAGCAGCTTTGTCACACTCACATTGGTGCTGCTAGCAGGCACAACAAGTATTAATGCACAGTTATCTTCCACATTTTATGACAGTGCATGCCCAAATGCGCTCAGCACCATCCGAACGGTGATTCGCACTGCTGTCTCCAAAGAACGCCGTATGGCTGCGTCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTTGATGAAACCTCCACTATCCAGAGCGAAAAAACTGCACTTCCGAATGATAATTCAGTAAGAGGATATGGAATCATTGATCAAGCAAAAGCTGAGGTTGAAAAACTATGCCCCCAAGTTGTGTCTTGTGCAGACATCGTAGCAGTTGCAGCACGCGATGCTTCATTCGCGGTGGGTGGTCCTTCATGGACAGTGAAGCTTGGACGGAGAGACTCTACCACCGCAAGTAGAAGTTTAGCCAACACTGAACTTCCATCATTTACAGACGATCTTCAAACTCTTATATCTCGTTTTGACAACAAAGGACTCACTGCTAGAGACATGGTCACTTTATCTGGCGCACACACAATTGGACAAGCTCAATGCTCTACATTTCGTGGAAGAATATACAACAATGCGAGTGACATTGATGCTGGATTTGGTAGTACTCGCCGACGCGGTTGTCCATCGACAATTAGTGCTGAGAATGATAAGAAGCTCGCAGCACTAGACTTGGTGACACCAAATTCATTTGACAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTCCGGTCAGACCAAGTTCTATTTAGGGGAGGATCTACTGATACTATTGTATCTGAGTATAGCAAAAATCCCACAACGTTCAAGTCTGATTTTGCAGCTGCTATGATCAAGATGGGAGACATTCAACCGTTGACCGGCTCAGCAGGAATCATAAGAAAGATTTGCAGTGCAATTAACTAA 981 0.4373 MGYRISRIISSFVTLTLVLLAGTTSINAQLSSTFYDSACPNALSTIRTVIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDETSTIQSEKTALPNDNSVRGYGIIDQAKAEVEKLCPQVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASRSLANTELPSFTDDLQTLISRFDNKGLTARDMVTLSGAHTIGQAQCSTFRGRIYNNASDIDAGFGSTRRRGCPSTISAENDKKLAALDLVTPNSFDNNYFKNLIQKKGLLRSDQVLFRGGSTDTIVSEYSKNPTTFKSDFAAAMIKMGDIQPLTGSAGIIRKICSAIN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0319 326 PANTHER PEROXIDASE 11 325 - -
Lja3g0319 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 Gene3D Peroxidase, domain 2 167 305 - -
Lja3g0319 326 PANTHER PEROXIDASE 72-RELATED 11 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lja3g0319 326 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lja3g0319 326 Gene3D - 33 326 - -
Lja3g0319 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Lja3g0319 326 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g0319 326 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0319 Lja-Chr3 3305639 3307421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0319 5 326 Peroxidase AT1G14550 65.123 1.44e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0319 K00430 - gmx:100786161 535.413