Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0312 ATGAGTACCAAACTAAGCAATCTCAAATTCTGTTCCTTCAGCCTCTCCCTCCTTCAAGACATTCAAATGTTGGAGATTCTAATTGCTGTCACGGTCTTCATAATCATTCATTCTCTCAGGCAAAAGAAGCATCATGGCCTACCCATTTGGCCTGTTCTTGGAATGTTACCTTCTCTTCTCACAGGACTTAGAACAAACACCTATGGATGGCTCACTGATGTGCTCACCAGGCAGAACATGACATTCACTTTCAAAGGGCCTTGGTTTAGCAGCCTCCAATGTGTCATCACCTCGGATCCACGCAACCTCGAGCACGTTCTCAAGACCAATTTCGCTGTCTACCCTAAAGGAGAATACTTCAGGAACACCCTCCAAGACCTCCTTGGAAATGGTATCTTCAATGTGGATGATGAGGCATGGCAGAAGCAAAGAAAAACAGCAAGCATTGAGTTTCATTCAGCAAAATTCAGAAAACTAACAACTGAGTCCTTGTTTGAGCTTGTCCACTCTAGGCTCTTACCAGTGTTGGAGGAATCTGTTACAAAATGTGTTCAAATAGACCTCCAAGATGTGCTTTTGAGGCTGACATTTGATAATGTGTGCATGATCGCGTTCGGCGTTGATCCAGGCTGTTTGAGTCTAGGATTGCCTCTGATACCATTTGCAAGAGCCTTCGAGGACGCAACGGAAGCCTCGCTGCTTCGATTCATCACCCCCACTTGTATATGGAAGACCATGAGGTTCCTCAACTTGGGTTTGGAGAGGAAGCTGATGAGATCAATAAAGAGGGTTGATGAATTTGCTGTTGATGTTATTCATACCAGAAAAAAGGAGCTTTCTTTGGAATTTGATGATGAGAAGAAGCAGAAATCAGATTTGTTAACTGTGTTTATGAAGATGAAGGATGAGAATGGAAAACCATACTCAGATAGGTTCTTGAGGGATATTTGTGTGAACTTCATCTTAGCTGGGAGGGACACTTCTTCAGTGGCTTTGAGTTGGTTTTTCTGGTTGCTTGATGAAAATCCTGACGTGGAGGAGAAGATACTAGAAGAAATATGCAGGGTAGTGAAGCAGAGAAAAGACATGACCAAGAATGAATTTGGAAATTCCTTGACATTTAAGCCAGAGGAGATTAAAAAGATGGATTATTTGCATGCTGCTTTATCAGAATCTCTGAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAAGATGATACTTTCCCAGATGGAACAGTGCTAAAGAAAGGAACAAAACTGATATATGCAATCTATGCAATGGGGAGAATGGAAAGCATATGGGGCAAAGACTGCAACGAGTTCAAGCCAGAAAGATGGTTAAGAGATGGTCACTTCATGAGTGAGTCTGCCTACAAATTCACTGCCTTCAATGGTGGACCTCGGCTATGTTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGTTGCAGCCAGCATCATATTCCGCTACCGTGTGAAGGTGGCAGAGAACCACCCTGTGGCGCCAAAGCTTGCCTTGACCATGTACCTAAAGCATGGACTGAAAGTTACCCTCTGCCCAAGGGATGCTGCAGAGATTCAAAAGCACTTTTGA 1608 0.4322 MSTKLSNLKFCSFSLSLLQDIQMLEILIAVTVFIIIHSLRQKKHHGLPIWPVLGMLPSLLTGLRTNTYGWLTDVLTRQNMTFTFKGPWFSSLQCVITSDPRNLEHVLKTNFAVYPKGEYFRNTLQDLLGNGIFNVDDEAWQKQRKTASIEFHSAKFRKLTTESLFELVHSRLLPVLEESVTKCVQIDLQDVLLRLTFDNVCMIAFGVDPGCLSLGLPLIPFARAFEDATEASLLRFITPTCIWKTMRFLNLGLERKLMRSIKRVDEFAVDVIHTRKKELSLEFDDEKKQKSDLLTVFMKMKDENGKPYSDRFLRDICVNFILAGRDTSSVALSWFFWLLDENPDVEEKILEEICRVVKQRKDMTKNEFGNSLTFKPEEIKKMDYLHAALSESLRLYPSVPVDHKEVVEDDTFPDGTVLKKGTKLIYAIYAMGRMESIWGKDCNEFKPERWLRDGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFRYRVKVAENHPVAPKLALTMYLKHGLKVTLCPRDAAEIQKHF* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0312 535 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 Gene3D Cytochrome P450 34 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PANTHER CYTOCHROME P450 13 527 - -
Lja3g0312 535 PANTHER CYTOCHROME P450 86B1-LIKE 13 527 - -
Lja3g0312 535 Pfam Cytochrome P450 88 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Lja3g0312 535 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0312 535 SUPERFAMILY Cytochrome P450 46 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0312 Lja-Chr3 3259994 3262966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0312 15 535 Cytochrome P450 AT5G23190 71.456 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0312 K15402 - gmx:100809503 875.93