Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0311 ATGTTCTCTTGGAACAGAGTTGCCAATATCATATTCTTGGAGTCACCAGTTGGTGTTGGCTTTTCTTACACCAACAATTCCAAAGATTTACAGGAACTTGGAGATAGAGTTTCTGCCAGTGACAACTATGCTTTCTTGATTGGTTGGTTCAAAAGGTTCCCAAGCTTCAGATCCCATGAATTTTATATTGCAGGAGAGAGCTATGCAGGGCATTATGTTCCACAACTTGCTGACCTCATCTATGAAGGAAACAAAGCAACACAACAGGGCTCTTTTATAAACTTGAAGGGATTTATGATTGGAAATGCTGTGATCAATGGTCTTACAGATGTGTATGGCATGATTGATTATGCTTGGAGCCATGCCATCATCTCAGACAAAGTATATCATGGGATAGAAAGAAATTGTGACTTTAAAAAAGAAAACCTAACAAAGGCTTGTGACTTGTATATGAGAGGGTTTTTTGGAGCTTACAAAGCCATTGACATATTTAGCATTTACTCACCAATTTGCCTCGATGACTCCAAAGGAAGAGTTTCAACCAAACTTGTTGTTGCTCCTCATCTTCTCACCCAACATGATCTGTGGCATACGCTACCATCAGGATATGATCCCTGTGCAGGAGATTATGTAAGCAAATATTTCAATAATCAGGAGGTTCAGAAGGCACTACATGCCAATATCACCAAATTGTCATACCCATATACTCTTTGCAGCTCTGTAATTCAAAATTGGACTGACTCACCAGACACGGTTCTACCAGTCATTCAGAAGCTCCTAAATGCAGGTCTACGCATTTGGATCTACAGTGGGGACACAGATGGTAGAGTTCCAGTGACATCAACAAGGTACAGCATAAACAAGATGGGTTTGAAAGTCAAGAAAGAGTGGAGAGCTTGGTTTCACGAGCATCAAGTGGCAGGGTGGGTGGAAGTTTATGAGGGTGGTCTCACATTTGCAACCATTAGAGGTGCTGGCCACCAAGTTCCAGTGCTTGCACCACAACAATCCCTTTCTCTCTTCACCCATTTCCTCTCTTCTCATTCCCTCCCATCTTCTCGCTTCTAG 1068 0.4195 MFSWNRVANIIFLESPVGVGFSYTNNSKDLQELGDRVSASDNYAFLIGWFKRFPSFRSHEFYIAGESYAGHYVPQLADLIYEGNKATQQGSFINLKGFMIGNAVINGLTDVYGMIDYAWSHAIISDKVYHGIERNCDFKKENLTKACDLYMRGFFGAYKAIDIFSIYSPICLDDSKGRVSTKLVVAPHLLTQHDLWHTLPSGYDPCAGDYVSKYFNNQEVQKALHANITKLSYPYTLCSSVIQNWTDSPDTVLPVIQKLLNAGLRIWIYSGDTDGRVPVTSTRYSINKMGLKVKKEWRAWFHEHQVAGWVEVYEGGLTFATIRGAGHQVPVLAPQQSLSLFTHFLSSHSLPSSRF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0311 355 ProSitePatterns Serine carboxypeptidases, serine active site. 63 70 IPR018202 GO:0004185
Lja3g0311 355 ProSitePatterns Serine carboxypeptidases, histidine active site. 317 334 IPR033124 GO:0004185
Lja3g0311 355 Gene3D alpha/beta hydrolase 1 353 IPR029058 -
Lja3g0311 355 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 347 IPR001563 GO:0004185|GO:0006508
Lja3g0311 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 49 74 IPR001563 GO:0004185|GO:0006508
Lja3g0311 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 13 23 IPR001563 GO:0004185|GO:0006508
Lja3g0311 355 PRINTS Carboxypeptidase C serine protease (S10) family signature 317 330 IPR001563 GO:0004185|GO:0006508
Lja3g0311 355 SUPERFAMILY alpha/beta-Hydrolases 2 352 IPR029058 -
Lja3g0311 355 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 35 2 347 - -
Lja3g0311 355 Pfam Serine carboxypeptidase 2 346 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0311 Lja-Chr3 3234443 3237946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0311 211 350 Calmodulin-binding Proteins AT2G22960 29.787 3.35e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0311 K16297 - gmx:100799746 561.607