Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0304 ATGCAGCTTTTCACATCATTGCCAGCTTTCTATCCTCACCTCCTTCCTTCACTGCTTTTCTGTTCTTCATTTCTTGTGTTTGTGTATCTTTTCCTACAACAATGGCTCCAATCCAAATGCAAACGTTTTCCCCCTGGTTCCATGGGTTGGCCTTACCTAGGAGAGACCTCCAAGCTCTACAATGAACATCCAAATACATTCTTCTCCAACAGACAGAAAAGAATACTGGGGTGTCCTAGTGTGGTGATTTCAAGCCCTGAGGCAATGAGGACTGTGCTTGTGACTCAAGCACATCTGTTCAGGCCAACATACCCAGTAAGCAAAGAGAAGATGATAGGGCCAGAGGCTGTTTTCTTTCAGCAGGGTGAATATCACTCCATGCTCAAGAAACTGATTCAGGCCACTTTTAAGCCCTCTGCTATAAAAACATCAGTCTCTGAGGTTGAGAAAATTGTCCTTAAACTGCTGCCAACTTGGGTCAACACAACCATCAATGCCTTACAAGAGATGAAGAGGTATGCTTTTGAGGTAGCTGCCATCTCTGCCTTTGGTCAAATTATGAAGCTTGAAATGGAGCAAATTAAAGGCCTGTATAGGAGCTTGGAGAAGGGCTATAATTCCTCTCCATTATATCTTCCTGGAACTTCCTACTGGAAATCAATGAAGGTCACAAAATGGATCAACTCACTGATTCTCAGATTGCTGATCTTTGGTGTGATCTTTGCTGCACACGATACCACTGCTAGTGTTTTGACATGGGTTCTCAAGTACTTGCATGATAATCACAATCTCCTGCAAGTTGTGACGGAAGAGCAACAAGGAATTAGAAACAAACTAGCTATAGAAAATCGTGGACTTACATGGGATGATACAAGGCAAATGTCACTCTCTGGCAGGGTAATCCAAGAAACTTTGAGGTGTGCAAGCATAGTGTCATTCACATTCAGAGAAGCTGTACAAGATGTTGAGTTGGAAGGTTACTTCATTCCCAAGGGATGGAAGGTCCTTCCCCTCTTGAGAAGCATTCATCACTCTGCTGATTTTTTTCCTCACCAACAAACATTTGACCCTTCAAGATTCGAGGAGAAAAGTCAAGAGATCCAAACAATTTCAAATGAAAAGGGCTACAAATGTTGA 1137 0.4257 MQLFTSLPAFYPHLLPSLLFCSSFLVFVYLFLQQWLQSKCKRFPPGSMGWPYLGETSKLYNEHPNTFFSNRQKRILGCPSVVISSPEAMRTVLVTQAHLFRPTYPVSKEKMIGPEAVFFQQGEYHSMLKKLIQATFKPSAIKTSVSEVEKIVLKLLPTWVNTTINALQEMKRYAFEVAAISAFGQIMKLEMEQIKGLYRSLEKGYNSSPLYLPGTSYWKSMKVTKWINSLILRLLIFGVIFAAHDTTASVLTWVLKYLHDNHNLLQVVTEEQQGIRNKLAIENRGLTWDDTRQMSLSGRVIQETLRCASIVSFTFREAVQDVELEGYFIPKGWKVLPLLRSIHHSADFFPHQQTFDPSRFEEKSQEIQTISNEKGYKC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0304 378 Pfam Cytochrome P450 44 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 Pfam Cytochrome P450 233 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 PANTHER CYTOCHROME P450 26 236 368 - -
Lja3g0304 378 PRINTS B-class P450 signature 316 343 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 PRINTS B-class P450 signature 299 310 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 PRINTS B-class P450 signature 344 359 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 Gene3D Cytochrome P450 234 374 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 Gene3D Cytochrome P450 34 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 SUPERFAMILY Cytochrome P450 38 366 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0304 378 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 22 234 - -
Lja3g0304 378 PANTHER CYTOCHROME P450 26 22 234 - -
Lja3g0304 378 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 236 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0304 Lja-Chr3 3169993 3176586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0304 17 361 Cytochrome P450 AT4G19230 50.255 8.77e-128 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0304 K09843 - gmx:100782541 492.656