Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g0298 | ATGAGGCTTAGAAAACCAGCTGGATATGATCCCTGTGCATCGGATCATACTTATGATTATTTAAATAGGCCAGAAGTTCAAAAGGCACTGCATGCCAATGTCACCAAAATTCCCTATCCATGGTCTCACTGCAGCGACAATGTCAGCAATTTTTGGAATGTCGCACCACAATCCACCCTCCCGGTCATTAAGAAGCTTATTGCTGGTGGTCTTCGCGTATGGGTTTACAGTGGAGATACCGATGGGAGAATTCCTGTGACTTCAACAAGATACACATTAAAAAAATTAGGGCTCAAAATTGTAGAAGATTGGACTCCTTGGTATACTAGCCGGCAGGTGGGAGGATGGACCGTTGAATATGATGGGCTGACTTTTGTGACCATTAGAGGTGCTGGTCATCAAGTTCCAACTTTTGCTCCCAAGCAAGCTCTCCAGCTAATTCGGCACTTCTTAGTCGATAAGAAATTACCACAACACCCAATTTAA | 486 | 0.4383 | MRLRKPAGYDPCASDHTYDYLNRPEVQKALHANVTKIPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYTLKKLGLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLVDKKLPQHPI* | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g0298 | 161 | PANTHER | CARBOXYPEPTIDASE | 5 | 160 | - | - | |
Lja3g0298 | 161 | Gene3D | - | 59 | 152 | - | - | |
Lja3g0298 | 161 | SUPERFAMILY | alpha/beta-Hydrolases | 5 | 158 | IPR029058 | - | |
Lja3g0298 | 161 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 5 | 160 | IPR001563 | GO:0004185|GO:0006508 | |
Lja3g0298 | 161 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 123 | 140 | IPR033124 | GO:0004185 | |
Lja3g0298 | 161 | Pfam | Serine carboxypeptidase | 5 | 151 | IPR001563 | GO:0004185|GO:0006508 | |
Lja3g0298 | 161 | Gene3D | - | 12 | 48 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g0298 | Lja-Chr3 | 3098395 | 3099989 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g0298 | 22 | 156 | Calmodulin-binding Proteins | AT2G22960 | 27.206 | 2.79e-14 | 65.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g0298 | K16297 | - | lja:Lj3g3v3527110.1 | 345.51 |