Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0298 ATGAGGCTTAGAAAACCAGCTGGATATGATCCCTGTGCATCGGATCATACTTATGATTATTTAAATAGGCCAGAAGTTCAAAAGGCACTGCATGCCAATGTCACCAAAATTCCCTATCCATGGTCTCACTGCAGCGACAATGTCAGCAATTTTTGGAATGTCGCACCACAATCCACCCTCCCGGTCATTAAGAAGCTTATTGCTGGTGGTCTTCGCGTATGGGTTTACAGTGGAGATACCGATGGGAGAATTCCTGTGACTTCAACAAGATACACATTAAAAAAATTAGGGCTCAAAATTGTAGAAGATTGGACTCCTTGGTATACTAGCCGGCAGGTGGGAGGATGGACCGTTGAATATGATGGGCTGACTTTTGTGACCATTAGAGGTGCTGGTCATCAAGTTCCAACTTTTGCTCCCAAGCAAGCTCTCCAGCTAATTCGGCACTTCTTAGTCGATAAGAAATTACCACAACACCCAATTTAA 486 0.4383 MRLRKPAGYDPCASDHTYDYLNRPEVQKALHANVTKIPYPWSHCSDNVSNFWNVAPQSTLPVIKKLIAGGLRVWVYSGDTDGRIPVTSTRYTLKKLGLKIVEDWTPWYTSRQVGGWTVEYDGLTFVTIRGAGHQVPTFAPKQALQLIRHFLVDKKLPQHPI* 162
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0298 161 PANTHER CARBOXYPEPTIDASE 5 160 - -
Lja3g0298 161 Gene3D - 59 152 - -
Lja3g0298 161 SUPERFAMILY alpha/beta-Hydrolases 5 158 IPR029058 -
Lja3g0298 161 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 160 IPR001563 GO:0004185|GO:0006508
Lja3g0298 161 ProSitePatterns Serine carboxypeptidases, histidine active site. 123 140 IPR033124 GO:0004185
Lja3g0298 161 Pfam Serine carboxypeptidase 5 151 IPR001563 GO:0004185|GO:0006508
Lja3g0298 161 Gene3D - 12 48 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja3g0298 Lja-Chr3 3098395 3099989 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0298 22 156 Calmodulin-binding Proteins AT2G22960 27.206 2.79e-14 65.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0298 K16297 - lja:Lj3g3v3527110.1 345.51