Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0266 ATGGCATCCATGGAAGACATGAACAACATCACTGAGGAAACAGCACTTCCAGGCTTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTCAAAAACATGGTTGCTGGCAAGAAACTTCGTTTCGACGTCATTGGCTTCCTCAACATCTATCATCATGATCCTTGGGACTTGCCTGGTCTGTCAAAGGTTGGGGAAAGAGAATGGTACTTCTTTGTACCAAGGGACAAAAAACATGGAAGTGGAGGAAGGCCTAACCGCACAACAGAAAAAGGGTTCTGGAAAGCAACCGGTTCAGACCGGAAAATCGTGACCTTGTCTGATCCGAAGCGTATAATCGGGTTGAGGAAGACCCTGGTTTTCTACCAGGGAAGAGCTCCAAGGGGATCCAAAACCGATTGGGTCATGAATGAGTACCGTTTGCCTGACAATTGCCGACTACCTAAGGACATAGTGCTATGCAAGATATATAGAAAGGCAACTTCCTTGAAAGTGCTGGAGCAGAGGGCAGCACTGGAGGAAGAGATGAAGCAATTTGGTTCTTCCCCTGCATCCCCTCCTTCATCCACAGACACCATGTCCTTTACACATGAAGACCAAAACATTATGTCCCTTCCTTTGTTCCAAGACGTTGTTCTTAAGAAAGAATCTGAAGCTGAAGCTGAAAATGAAGAAATGATGCTATCTATGTCAATGTCAGTGCCAAAGCAAGAAAAATCACAGACTCAATTGGTTTTCAACGACAGCAACAAAAGCACTTGTGGTGGTGGTGGTTCATCTCTTCAATTGCCCTTGGGGAATGACAAGCTACCAGAGCTTCAGTTGCCAATGGTTACTGACTGGACCACCCAGCTAACCCAAGATACATTTTGGGCTCACTTGAACAGTCCCTGGCTGCAAAACTTGACTCCTTCAAGCATCCTCAACTTTCATTCATAG 945 0.454 MASMEDMNNITEETALPGFRFHPTEEELLDFYLKNMVAGKKLRFDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQGRAPRGSKTDWVMNEYRLPDNCRLPKDIVLCKIYRKATSLKVLEQRAALEEEMKQFGSSPASPPSSTDTMSFTHEDQNIMSLPLFQDVVLKKESEAEAENEEMMLSMSMSVPKQEKSQTQLVFNDSNKSTCGGGGSSLQLPLGNDKLPELQLPMVTDWTTQLTQDTFWAHLNSPWLQNLTPSSILNFHS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0266 314 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lja3g0266 314 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Lja3g0266 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 312 - -
Lja3g0266 314 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 8 312 - -
Lja3g0266 314 SUPERFAMILY NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Lja3g0266 314 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0266 Lja-Chr3 2694406 2696296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0266 12 313 NAC Transcription Factor Family AT2G17040 58.746 6.03e-120 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lja3g0266 NAM 1.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0266 - - gmx:732555 474.167