Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0195 ATGGGAGGTGGAATCAATGAGGAAGGAGGAGGTGTTGTTGCTGTGGGAGAAAGGGAGGAGGAGAACAAGTGGCCACCATGGCTGAAACCTCTTTTGAAGACTAACTTCTTTGTTCAATGCAAAGTCCATTCAGATTCCCACAAGACTGAATGCAACATGTTTTGTTTGGATTGTGTGAATGGGGCTCTTTGCTCTGCTTGTCTGGCTTCCCACAAGGAACACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAGCTGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTTTTGAATGAAAGGCCTCAACCTAGGCCAGGAAAAGGGGTCACCAATACCTGCCATGTCTGTGAGCGCAGCCTACTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTCAGGAAGAATAAAATGTTAGGTGAGACAGATGGGTCTGATGTTGAAGAATCAATGAGTGGAGTTATTAGCAATGGAAGTGCCAGAAACAAAATCCATAACTTCTCACCTTCAACTCCACCACCAACAGTGGTGAATTACAGAACAGCCAAGAGGAGAAAAGGTGTTCCACATAGAGCTCCAATGGGGGGTGGGGAAATTATAGAATACTAA 684 0.4401 MGGGINEEGGGVVAVGEREEENKWPPWLKPLLKTNFFVQCKVHSDSHKTECNMFCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCHVCERSLLDSFSFCSLGCKIVGTSKKFRKNKMLGETDGSDVEESMSGVISNGSARNKIHNFSPSTPPPTVVNYRTAKRRKGVPHRAPMGGGEIIEY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0195 227 Pfam PLATZ transcription factor 80 151 IPR006734 -
Lja3g0195 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 222 - -
Lja3g0195 227 MobiDBLite consensus disorder prediction 208 227 - -
Lja3g0195 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0195 Lja-Chr3 1909748 1912219 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lja3g0195 PLATZ 9.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0195 - - gmx:100810757 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0195 3 1909748 1912219 Lja3g0195 3 1909748 1912219 ECH