Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0186 ATGGAGACTCATAATTCAACATGTCCACCACCAATGAAGGCCACATCAAACGGGGCGTTTCAACATGAGAACCCCATGGATTATGCACTTCCTTTATTGATTGTGCAGATATGTTTGGTTGTGGCATTTACCAGATTCCTTGCATTCCTTTGCAGGCCCCTTAGACAACCTAGAGTTATTGCAGAAGTCATTGGAGGGATATTACTTGGACCATCTGCAATTGGGAGGAGCCAGAAATTTCTGGACACATTTTTCCCCAAGAAAAGCTTAACTGTTCTTGACACACTGGCTAATGTTGGCCTTCTGTTCTTCTTGTTTCTAGTGGGTCTTGAGCTTGACATGCGTTCTATACGCAGAACTGGTTACAAGGCCTTATGCATTGCCCTTGCTGGAATCACATTCCCTTTTGTGCTTGGCATTGGCACCTCATTTGCTCTTCGCGCGACCATATCAAAAGATGTTGATCCAGGCTCCTTCCTTGTCTTCATGGGTGTTTCTCTCTCAATCACCGCCTTCCCCGTTCTCGCTCGAATCCTAGCTGAACTCAAACTCCTCACAACCGATGTTGGTCGCATAGCGATGTCTGCAGCTGCTGTCAATGATGTTGCAGCATGGATACTGCTTGCTCTTGCCATAGCACTTTCTGGCAATAACACTTCCCCACTTATTTCCTTATGGGTCCTGCTTTGTGGTGCTGGTTTTATCCTCTTTGCTATCTTTGCTATAAAGCCTTTACTTTCATTAATGGCGAAGCATTCCCCTGAGGGCGAACCGGTGAGGGAGATCTACATTTGCATCACCTTGACAGTAGTCCTGGCTTGCAGTTTTGTTACTGATACTATTGGCATCCATGCACTCTTTGGGGCTTTTGTAGCTGGCATTGTTGTTCCTAAGGATGGTCCCTTTGCTGGAGTTTTGACTGAGAAGATAGAGGACCTTGTAATGAGTCTATTGTTGCCACTCTATTTTGTGTCAAGTGGATTAAAGACTAATGTGGCAACCATAAGTGGGGCAACCTCTTGGGGCTTACTATTTCTTGTTGTATTCACTGCTTGCTTTGGAAAGATCCTTGGCACATTTACTGTGTCCATGTTATGTAAGGTGCCTTTTAGAGAAGCCCTCACTCTTGGATTTCTCATGAACACCAAGGGCTTAGTGGAGCTCATTGTTCTCAATATTGGCAAGGATCGCAAGGTACTGAATGATCAGGTATTTGCAATCTGTGTTCTCATGGCATTGGTAACCACTTTCATGACTACCCCAATAGTGATGGCAGTGTATAAACCAGCTAGGAGGGGATCACCTTACAAGCACAAAACAGTTCAGCGCAAAGATCCTGACACAGAATTTCGAGTGCTGGCTTGCTTCCACAGTACCCGCAACATTCCAACCTTGATCAATCTGATAGAATCTTCCCGGGGAACCAGGAAGCGAGGAAAGCTCTGCATTTATGCCATGCACTTGATGGAACTCTCAGAGAGACCTTCAGCCATCACGATGGTTCATAAGGCTCGCAACAATGGCATGCCATTTTGGAACAAAAGACAGGACAATGAAGATCAGATGGTGATTGCATTTCAGGCTTATGGCCATTTAAGCAGTGTCAATGTTCGCCCCATGACAGCGATCTCTTCCTTCACCAACATTCATGAGGACATCTGTTCTAGTGCACACCAGAAGCGAGTAGCAATGATTATCCTTCCATTCCACAAACACCAACGCCTTGACGGGACTATGGAGTCACTGGGAAACTCGATCCACACAATGATTGGTCTTGTGCTCAGCCATGCTCCTTGCTCGGTGGGGATTTTGATTGACCGTGGCCTCGGAGGGACAAGCCAAGTCCATGCTAGTGATGTGTCCTACAATGTTGTGGTAGTCTTCTTTGGTGGATGCGATGACCGCGAAGCACTTGCCTATGGGATGAGAATGGCAGAGCACCCTGGGATCTTGGTCACTGTTATTAAGTTTGTGACTCCACCGGGGAAGACAACAGCCTTTGGTGCCAAATTGGTTGGTGTATCAGCCAATGAGGATAGGAAGGTAATAAAAGTGACTGATGGCACCACCAAAGACGAAGATAAAGAAGAGGATGACCAATTTTGGTCTGAGTTCCTAAGTGTGTGCTACAAGAGTGAAGACTCCATGGTGTATGAGGAAAGATTGGTGGAAAGCAAAGAAGATGTTGTAACTGCATTGAGGGAAAAGAATAAAAGCAACCTGATTTTGGTAGGTAGAATGCCACCAGTAGCACCTTTGGATGTAAGAAGTGATTGCCCTGAGCTTGGGCCTATTGGTAGCTACTTGGCTTCTTCAGAGTTCTCCACTTCTGCATCAGTCATGGTGTTTCAACAGTATAATCCCAAAACAGACGTTCACCCCTTGGTTATGGAGGTTTCTGATTTCCCCATCATCCCAGACACACCAAAGCATCCTGTATAG 2442 0.4582 METHNSTCPPPMKATSNGAFQHENPMDYALPLLIVQICLVVAFTRFLAFLCRPLRQPRVIAEVIGGILLGPSAIGRSQKFLDTFFPKKSLTVLDTLANVGLLFFLFLVGLELDMRSIRRTGYKALCIALAGITFPFVLGIGTSFALRATISKDVDPGSFLVFMGVSLSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGNNTSPLISLWVLLCGAGFILFAIFAIKPLLSLMAKHSPEGEPVREIYICITLTVVLACSFVTDTIGIHALFGAFVAGIVVPKDGPFAGVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGATSWGLLFLVVFTACFGKILGTFTVSMLCKVPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQVFAICVLMALVTTFMTTPIVMAVYKPARRGSPYKHKTVQRKDPDTEFRVLACFHSTRNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAITMVHKARNNGMPFWNKRQDNEDQMVIAFQAYGHLSSVNVRPMTAISSFTNIHEDICSSAHQKRVAMIILPFHKHQRLDGTMESLGNSIHTMIGLVLSHAPCSVGILIDRGLGGTSQVHASDVSYNVVVVFFGGCDDREALAYGMRMAEHPGILVTVIKFVTPPGKTTAFGAKLVGVSANEDRKVIKVTDGTTKDEDKEEDDQFWSEFLSVCYKSEDSMVYEERLVESKEDVVTALREKNKSNLILVGRMPPVAPLDVRSDCPELGPIGSYLASSEFSTSASVMVFQQYNPKTDVHPLVMEVSDFPIIPDTPKHPV* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0186 813 Pfam Sodium/hydrogen exchanger family 38 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja3g0186 813 PANTHER CATION/H+ EXCHANGER 3 1 809 - -
Lja3g0186 813 PANTHER CATION/H + ANTIPORTER 1 809 - -
Lja3g0186 813 Gene3D - 32 434 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0186 Lja-Chr3 1851769 1854787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0186 1 802 Antiporter Super Family AT3G17630 68.657 0.0 1103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0186 - - gmx:100818975 1340.48