Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0185 ATGGTAAACCCAGAAGTGTCGAGTCAGGCAAAAATATCCTATAGGCCTATACAACCTTCTGACCTCAACATTTTAGAGCATATCTACACCGAACTATTTCCTATAAGGGCTCCTCCTGCTTTTTACCATGATGTGGTAAATGGATGCGGCATTGTGTCATGGGGAGCTGTGGACTCTAGTCGGCCCGATGGCCAAAGTGATGAACTCATTGGATTTGTGATAGCATGTGTTGTTCTTGCAAAAGAAAGCGAGGTACTGGATATGCTCGGATATGACTCATCCAAATCAGATCAAACTTTAGTGCACATTCTGGCACTGGGAGTAGTGGAGGCCTATCGAAATTTTGGAATAGCTTCTTCTCTGCTTAGGGAGGTCATAAAATATGCTTCAAGTACTCCAACCTGCCTATCTGTTTTCTTGCATGTAATTTCTGACAATAATCCAGCAATCTCTCTGTACAAGAAAATGTCTTTCAAGTGTGTGAGAAGGCGGCAGGGATTTTATTTAATAAACGGCCAACATTATGATGCATACTTGTTCCTGTACTGCATAAACGGGGGGCGATCTCCTTGGTCACCATTACAGCTTCTAACTTCAATAGTAAGCTACACGAGGACCGGGTTTAATTCGATGGTCGGAAGACTGTGCAAGAGTGAAGACGGGAAAGTCTCAACTCTCAAGGTGGGAAAAGTGTAA 696 0.4325 MVNPEVSSQAKISYRPIQPSDLNILEHIYTELFPIRAPPAFYHDVVNGCGIVSWGAVDSSRPDGQSDELIGFVIACVVLAKESEVLDMLGYDSSKSDQTLVHILALGVVEAYRNFGIASSLLREVIKYASSTPTCLSVFLHVISDNNPAISLYKKMSFKCVRRRQGFYLINGQHYDAYLFLYCINGGRSPWSPLQLLTSIVSYTRTGFNSMVGRLCKSEDGKVSTLKVGKV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0185 231 CDD NAT_SF 76 129 - -
Lja3g0185 231 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 184 IPR000182 GO:0016407
Lja3g0185 231 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 1 221 IPR045141 GO:0004596
Lja3g0185 231 Pfam Acetyltransferase (GNAT) family 47 158 IPR000182 GO:0016407
Lja3g0185 231 Gene3D - 4 187 - -
Lja3g0185 231 PANTHER HISTONE ACETYLTRANSFERASE MCC1 1 221 - -
Lja3g0185 231 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 185 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja3g0185 Acetyltransf_1 9.8e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0185 K22767 - gmx:100794189 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0185 3 1849363 1851563 Lja3g0185 3 1849363 1851563 ECH