Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0178 ATGGATTCACTATGGTATGTGTTGCTCCTTCTGTTGACTTGTATCATTGTTCATGCTCTCCTTTTCCATTTTGCAAAAAACAACAAACCCAACAACTACAAGCTTCCACCAGGACCTTCCCCTCTTCCCATCATTGGAAACCTCCTTGAACTTGGCAAAAACCCCCACCAATCCTCTGCTAACCTTGCCAAGTTATATGGTCCAATAATGACATTAAAATTGGGACAATTGACCACCATTGTGATCTCTTCAGCTGACATGGCCAAAGAGGTGCTCCAAACCCATGATAAGTTCTTGTCCAACCGCACCGTCCCGGAGGCTGCATCAGTTCACAATCACCATCATCATAGCATGGCCTTCATGCCCATCACACCCCTTTGGAGGACCCTTAGGAAGATATGCAACAATCAACTATTCTCTAACACGGTATTGGGTACAAGCCAAGATCTTAGGCACAAGCAACTTCAAGAACTCCTCAGTGAAATCCACCAATGCAGCATGAGCGGTGAAGCTGTTGATATTGGAAGAGTAGCTTTCAAGACCACAATTAATTTGTTATCAAAGACAATTTTTTCTCACTCTATAGGTAAAGTTGGAGAGTTAAAGGAGTTAGTGGCGAATATCATGAGAGAGGGTGGAAAACCAAACTTGGCAGACTATTTCCCTGCCTTGAAGATGGTTGATCCGCAGGGCATTCGAAGTCGTAATACTGTTAATGCTGGAAAGGTGTTAGAAGTCTTCGATCACTTGATTAACCAACGGAAGAAGCTCAGATCGGAAACAGGTTTTGACCCCAACAGTGACATGTTAGAAACATTGCTAAACATGTCTCATGAGAATAGCCAAGAGGTGGAAAAAATAAATATTCAACATTTAATGATGACCCTATTTGTTGCTGGAACTGATACAATGACATCCACATTGGAATGGGCAATGACTGAGCTACTATGCAATCCAACAACAATGTCAAAAGCTAAAAAGGAGCTTGAAGAAACCATTGGAAAGGGTAACCCTATTGAAGAAACAGACATTGTTAAACTACCCTATCTACAAGCAATAGTGAAAGAGACATTTCGTTTACACCCTGCAGTGCCATTCTTAATCCCTAGAAAAGCTGATACTAATGTAGAACTCAATGGCTACACCATCCCAAAAGGTTCACAAATCCTCATCAATGTGTGGGCCATTGGAAGGGATTCAAGTACATGGAATGACCCACATTTGTTTTCACCAGAGAGGTTCATGGGATCAGACATTGATGTTAAAGGGAGACACTTTGAGTTGATACCATTTGGTGGTGGAAGAAGAATGTGCCCTGGGTTACCATATGCTATGAGAGTGTTGTTGTTGACGTTAGGTTCATTGATTAATGTTTTTGATTGGAGGCTTGAAAATGATATGAGACCTGAGGATATCGATATGGAAGAAGAATTTGGAGTAGCCTTGCAAAAGTCTATGCCTCTCAGAGCTATTCCAATCAAAGTGAAAAGTTAA 1494 0.4143 MDSLWYVLLLLLTCIIVHALLFHFAKNNKPNNYKLPPGPSPLPIIGNLLELGKNPHQSSANLAKLYGPIMTLKLGQLTTIVISSADMAKEVLQTHDKFLSNRTVPEAASVHNHHHHSMAFMPITPLWRTLRKICNNQLFSNTVLGTSQDLRHKQLQELLSEIHQCSMSGEAVDIGRVAFKTTINLLSKTIFSHSIGKVGELKELVANIMREGGKPNLADYFPALKMVDPQGIRSRNTVNAGKVLEVFDHLINQRKKLRSETGFDPNSDMLETLLNMSHENSQEVEKINIQHLMMTLFVAGTDTMTSTLEWAMTELLCNPTTMSKAKKELEETIGKGNPIEETDIVKLPYLQAIVKETFRLHPAVPFLIPRKADTNVELNGYTIPKGSQILINVWAIGRDSSTWNDPHLFSPERFMGSDIDVKGRHFELIPFGGGRRMCPGLPYAMRVLLLTLGSLINVFDWRLENDMRPEDIDMEEEFGVALQKSMPLRAIPIKVKS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0178 497 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lja3g0178 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 496 - -
Lja3g0178 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 496 - -
Lja3g0178 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0178 497 Gene3D Cytochrome P450 21 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0178 Lja-Chr3 1809146 1810893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0178 1 497 Cytochrome P450 AT2G45550 44.597 1.35e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0178 - - gmx:100798291 611.683