Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0171 ATGGCCACCGCTTCATCGAGCGCCGCGTCTCTGGGCGCAACACCCGCAGAGAGAGATCTTCAGCCATTCTTTGTTCTTCATAAAGCGTCAACCGGAAGAAAAGATAGAACGTCGAATGGGCAGGGGAAATTGCGCAAGAGAAACGAGCCGTCTTCATCGTCGCCAAAATGCGGAAAGAAACTGGAAGGAAGTATGTCTGAAGGAGGTGATCGCCTTTTGTTTGAGCAACAGCAGGTTGAAGCTTTTGACATTGTTTGGGCAAAGATTGAATCTACCATTAAGGACGTTTTGAGAGATCAAAATGCTAGTGTATTTAACAATATACAACAATGGGTTCTGGAGTGCTTCAATGCTACCAGACTGCTTGGAGAACCTAGCATTGCTGAAGCAACTAGGTCTTTTCCTGTTCTAAATAATACTACTCCCGGGCAGCTGTTCACTGCATTAGTTATTACCAGAAACATGGAGTTTGTTGATGATATATTGACATTTGAAGAGCTAAGCCATTGCTTGAAATCCCATGGATGCCATGTGGCTATGCTTTCATCACTGGAGTTTTCGTTAAAAAATGGGATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGGTGTGCTATTGACACAGCCGATATATCAATCTTAGCATCATGGTATAGAGAACAAGACAGCTACAATAAACCATTGGTGCTGATCATTAATGATTTGGAAAGATGTTGTGGATCAGTCTTAACTGATTTTATCCTGATGTTAAGTGAATGGGTTGTCAAGGTGCCAATTATCTTAATATTTGGAGTTGCAACAACGGTGGATGCTCCAAGAAACATTCTGCCATCACATGCTCTTGAGCATTTGTGCCTCTCTAAGTTTATGCTTGGAGCACCAGCTGAGAGAATGGATGCAATTGTTGAAGCTGTTCTTGTGAAACATTGCACCACATTTAATATAGGTTATAAAGTGGCACTCTTCCTTCGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGGGCTTTGAAGGTGGCATGCTTATTACATTTCTCTATGGAACCTCTGAGTCTCATACATGGGCAAATACTTGCTGAAGACCAAAAGGAGGGAAAGTCTGCATTTCTGCCTGAAACTATGTTGAAATACATGGATGAACTTCCATCGTATGCAAGGAATCAAATGGATGATCAGACTAAAGAGAGCATGGCTAAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTTTGGAGCACTGTGGTTCTCTGCCTATATGAAGCTGGAAAATATAGCAAAGTGCAATTACTGGATTTGTTGTGTGAAGCACTCAATAAAGATTTGTACCCATTAAGGGATTCAAGTTGTCAGGAGGGGGATGAAAAAGATAATGGAGTGTCCTTGACAAATGAACCCTGTCAACAATATTCTATCATGCAAAGCAATGGTTTTATTTGCCAGATAGGACGCAAAGTGAGGGACCTCCCAACAGGAATGCTATATCGGTTGATTGAGAGTTGGGAAAAACTTACTGCAGATATTCCAGAGATTCATCAGAAACTGAAAAAGTTGCAATCTTCAGTAGCACGTGAAGGTGGAAAGAGTCCCCGCAAGAGTTCCAAGGACATTTCCAAGAGATATACGTCCAGAGTTTCAGTTAACACCGACAAGGACTCAAGAACATTAAACTCCCAAGCTGGTACATTTCTTGATTATTTAATTAGAAATTTTTTGAGGCCCATTGAAGGAATGCCTTTCCATGAATTTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGAATGGGGATCCAAGAAAAAGGATTCAAGTTGATCTGTTGGAGTTCCACAAGATTTTAGGGTGCAGTTGCTGTTACAAGAGTGGCAATGCCCTATTGTCATCCTGGCATGATTCCTCAATTATGTATTCCCTAGGTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAAGCTTTTAAAACAATTGTTCTTCAAAATACAAATAAAAGGAAACAAAAATCAAAGCAATCCCAGCTCCCAAAGAAGAGAAAGGATATGAATGGATCTGGAAACGAAAATGAAGCATCAATTCAAGCACGCTTTTGCAGGGCAATAACAGAGCTACAGATCACTGGGCTTATTAGAATGCCCAGCAAAAGACGCCCAGATTTTGTACAAAGAGTAGCATTTGGACTCTGA 2208 0.4099 MATASSSAASLGATPAERDLQPFFVLHKASTGRKDRTSNGQGKLRKRNEPSSSSPKCGKKLEGSMSEGGDRLLFEQQQVEAFDIVWAKIESTIKDVLRDQNASVFNNIQQWVLECFNATRLLGEPSIAEATRSFPVLNNTTPGQLFTALVITRNMEFVDDILTFEELSHCLKSHGCHVAMLSSLEFSLKNGIAGCLKALLREFLGCAIDTADISILASWYREQDSYNKPLVLIINDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTVDAPRNILPSHALEHLCLSKFMLGAPAERMDAIVEAVLVKHCTTFNIGYKVALFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIHGQILAEDQKEGKSAFLPETMLKYMDELPSYARNQMDDQTKESMAKGLSELVTVQKLWSTVVLCLYEAGKYSKVQLLDLLCEALNKDLYPLRDSSCQEGDEKDNGVSLTNEPCQQYSIMQSNGFICQIGRKVRDLPTGMLYRLIESWEKLTADIPEIHQKLKKLQSSVAREGGKSPRKSSKDISKRYTSRVSVNTDKDSRTLNSQAGTFLDYLIRNFLRPIEGMPFHEFFCFKNVEKLQLVLNGDPRKRIQVDLLEFHKILGCSCCYKSGNALLSSWHDSSIMYSLGQEHGDLINLHDWFQAFKTIVLQNTNKRKQKSKQSQLPKKRKDMNGSGNENEASIQARFCRAITELQITGLIRMPSKRRPDFVQRVAFGL* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0171 735 MobiDBLite consensus disorder prediction 25 64 - -
Lja3g0171 735 MobiDBLite consensus disorder prediction 524 551 - -
Lja3g0171 735 MobiDBLite consensus disorder prediction 29 53 - -
Lja3g0171 735 Pfam Origin recognition complex winged helix C-terminal 606 733 IPR040855 -
Lja3g0171 735 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 734 IPR020795 GO:0003677|GO:0005664|GO:0006260
Lja3g0171 735 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 1 734 - -
Lja3g0171 735 MobiDBLite consensus disorder prediction 671 696 - -
Lja3g0171 735 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 75 204 IPR045667 -
Lja3g0171 735 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 226 358 IPR045667 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0171 16 667 Core DNA Replication Machinery Family AT5G16690 46.260 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0171 K02605 - gmx:100780646 1118.61