Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0141 ATGGAGCGGTACCTGAGAGAAAACTTCCACGTTCAGCCCAAGCGCCCTCCAGAGGAAGCACTTCGCCGATGGAGATCCGCAGTCTCCGTCGTCAAGAACCCCCGCCGCCGCTTCCGCAATGTGGCCAATCTCGCCCAACGTGCAGAAGCCGATCGGAAGCGCAAGAAGCTCCAGGAAAAGATACGGGTAGCTCTCTATGTGCAAAAGGCAGCGTTGCATTTTATAAACGCTGGGAGCCAAGTTAGTGGTGGCTACATGCTCTCCAAAGAGGTCCATGAAGCAGGTTTCCGAATCGAGCCAGATGAATTAGCCTCCATTGTTCGGTCCCACGACACAAAATCTTTGGAACACCATAAGGGAGTTGAAGGATTAGCAGAAGCTCTCCGTGTGTCATTGCAAGACGGCATCAGTTCACACGATGTAGAACACAGACAGAAAACCTATGGTTTTAACCGCTTTACGGAGAAGCCCTCCAGAAGTTTTTGGATGTTCGTTTGGGATGCAATGCAAGATTTAACTCTAATTATCCTCATGGTATGTGCTGTGGTTTCAGTAGGTGTTGGAATCTCAACTGAAGGTTGGCCAAAAGGTATGTATGATGGAGTGGGAATCATACTGTGTATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTACAAACAGTCTTTACAATTCAAGGATTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTTACAAGAGATAGTAGGAGGCAAAAGGTTTCAATTTATGATCTAGTGGTAGGAGATGTGGTTCATCTCTCAATTGGAGACATAGTTTCTGCAGATGGTTTATTCATATCAGGGTTTAGCTTATTGATTGATGAGTCAAGTTTATCAGGTGAGAGTGAGGCTGTGAATGCTGATCAACAGAAGCCTTTTCTTCTATCTGGAACCACAGTGCAAGATGGCTCTGCTAAAATGCTAGTGACTTCGGTTGGTATGAGAACTGAATGGGGAAGGTTGATGGCAACTCTGAATGAAGGAGGAGATGATGAGACACCCCTTCAGGTTAAATTGAATGGGGTTGCAACCATTATTGGAAAAATAGGCTTGGGTTTTGCCTTGTTGACATTCCTTGTTCTTACTGGTAGGTTTTTGTTTGAGAAAATAGTGGACCACAAGATCACAGAATGGGGTCTAGATGATGCATCTAAGCTTCTCAATTTCTTTGCAACTGCTGTCATTATAATAGTTGTGGCAGTTCCTGAGGGGTTACCTTTGGCAGTGACACTAAGCCTTGCATTTGCAATGAAGAAACTAATGCAAGATAAGGCACTAGTCAGGCACCTCGCTGCATGTGAGACAATGGGTTCTGCTGGTTGCATTTGCACAGACAAGACTGGGACTTTAACTACAAATCACATGGTTGTAGATAAAATATGGATTTGCCAACATACCAAGATAATTCAAAGAGGCAACAATGATGATGTGTTGAAAAAATCCATTTCTGAACAGATATTTGATCTCTTTTTGCAGTCCATATTCCAAAACACTGGCTCAGAGGTAGTCAAAGGGCAAGATGGAAAAACCAAGGTCATGGGTACTCCCACAGAGTCAGCATTGTTGGAACTTGGTTTGCTTTTGGGAGGTGATTCCAAGTTCTATAATAACAAGTATAAGATAGTAAAAGTTGAGCCTTTCAATTCAATCAAAAAAAAGATGTCAGTTCTTGTGTCTCTTCCTGATGGTACCAACAAGTATAGAGCATTTTGCAAAGGAGCATCAGAAATAGTTCTAAAAATGTGTGACAAAGTTGTTAGTGAAGACGGCAAAGTCGTAGATTTGAACGAGCAACAGAGAAACAGCATCACAGAAGTTATCAATGGTTTTGCTTCTGAGGCTCTGAGAACACTCGGCATAGCCTTCAAGGATGTTGAAGGATCATCCTCTGGAGGAGATAATAACATTCCTGAGGATAAGTACACGTTGATTGCAATTATTGGGATCAAGGATCCAGTGAGGCCTGGTGTAAAAGAAGCTGTGAAGACTTGTTTAGATGCTGGGATAATTGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAAAGAATGTGGCATCTTGACTGATGGATTGGCGATAGAGGGACCGGATTTCCGGAACAAGACTCAGCAAGAAATGGAAGAGATAATTCCCAAAATACAGGTAATGGCTCGATCTTTGCCTCTTGACAAACACACTTTGGTGACCCGTTTGAGGAATGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAACGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGCATTGCTGGAACTGAGGTAGCAAAAGAGAATGCTGATGTGATTGTAATGGATGATAACTTCGCCACCATAGTGAATGTTGCCAGATGGGGTCGTTCTGTTTACATTAACATACAAAAATTTGTCCAGTTCCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAACTTCATTTCAGCTTGTGTGTCAGGCTCTGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTGAATATGATCATGGACACTCTAGGAGCATTGGCATTGGCTACAGAACCTCCCCATGATGGGCTAATGAAAAGGCCACCTATTGGAAGGAATGCCAAATTCATCACTGGGGTCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAATTATTGTCCTTTTGATTCTCAAATTTAAAGGAAAACAGATTCTCAAGCTCAATGGACCTGAAGAGGATGCCACCTCTGTTCTGAATACAGTAATATTCAACACCTTTGTGTTTTGCCAGGTATTCAATGAGGTAAACAGCCGTGAGATGGAGAAAATTGATGTTTTCACCAACATGTTCAGCAGCTGGATTTTCTTGATGGTCATGGCCTCAACGGTATTCTTTCAAGTCATAATAGTTCAGTATCTTGGTGCTTTTGCTCAAACAGTTCCACTGAGCCAGGAGTTATGGCTAACCAGTGTCATGATTGGTGCGGTAAGTTTACTCGTAGCTGTTGTCCTCAAGTGCATCCCAGCTCCTGTGAGTAATTACATCACCGCCCATCACGATGGTTACGAGCAGCTCCCCACCGGACCAGAGCTCGCATGA 3129 0.4302 MERYLRENFHVQPKRPPEEALRRWRSAVSVVKNPRRRFRNVANLAQRAEADRKRKKLQEKIRVALYVQKAALHFINAGSQVSGGYMLSKEVHEAGFRIEPDELASIVRSHDTKSLEHHKGVEGLAEALRVSLQDGISSHDVEHRQKTYGFNRFTEKPSRSFWMFVWDAMQDLTLIILMVCAVVSVGVGISTEGWPKGMYDGVGIILCILLVVFVTSISDYKQSLQFKDLDKEKKNVSIQVTRDSRRQKVSIYDLVVGDVVHLSIGDIVSADGLFISGFSLLIDESSLSGESEAVNADQQKPFLLSGTTVQDGSAKMLVTSVGMRTEWGRLMATLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLFEKIVDHKITEWGLDDASKLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMQDKALVRHLAACETMGSAGCICTDKTGTLTTNHMVVDKIWICQHTKIIQRGNNDDVLKKSISEQIFDLFLQSIFQNTGSEVVKGQDGKTKVMGTPTESALLELGLLLGGDSKFYNNKYKIVKVEPFNSIKKKMSVLVSLPDGTNKYRAFCKGASEIVLKMCDKVVSEDGKVVDLNEQQRNSITEVINGFASEALRTLGIAFKDVEGSSSGGDNNIPEDKYTLIAIIGIKDPVRPGVKEAVKTCLDAGIIVRMVTGDNINTAKAIAKECGILTDGLAIEGPDFRNKTQQEMEEIIPKIQVMARSLPLDKHTLVTRLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFATIVNVARWGRSVYINIQKFVQFQLTVNVVALMLNFISACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNAKFITGVMWRNIIGQSIYQIIVLLILKFKGKQILKLNGPEEDATSVLNTVIFNTFVFCQVFNEVNSREMEKIDVFTNMFSSWIFLMVMASTVFFQVIIVQYLGAFAQTVPLSQELWLTSVMIGAVSLLVAVVLKCIPAPVSNYITAHHDGYEQLPTGPELA* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0141 1042 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1026 - -
Lja3g0141 1042 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Lja3g0141 1042 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Lja3g0141 1042 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0141 1042 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 204 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0141 1042 Gene3D - 449 801 IPR023214 -
Lja3g0141 1042 SFLD Haloacid Dehalogenase 434 808 - -
Lja3g0141 1042 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0141 1042 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0141 1042 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0141 1042 Pfam haloacid dehalogenase-like hydrolase 450 770 - -
Lja3g0141 1042 Gene3D - 17 76 - -
Lja3g0141 1042 CDD P-type_ATPase_Ca_PMCA-like 141 889 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Lja3g0141 1042 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Lja3g0141 1042 PANTHER CATION TRANSPORTING ATPASE 3 1026 - -
Lja3g0141 1042 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 109 1019 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lja3g0141 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1018 IPR023298 -
Lja3g0141 1042 Pfam E1-E2 ATPase 237 430 - -
Lja3g0141 1042 SUPERFAMILY Calcium ATPase, transduction domain A 237 332 IPR008250 -
Lja3g0141 1042 Gene3D - 167 1017 - -
Lja3g0141 1042 SMART Cation_ATPase_N_a_2 115 189 IPR004014 -
Lja3g0141 1042 Pfam Cation transporter/ATPase, N-terminus 116 184 IPR004014 -
Lja3g0141 1042 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 666 IPR023299 GO:0000166
Lja3g0141 1042 Gene3D - 462 661 IPR023299 GO:0000166
Lja3g0141 1042 SFLD p-type atpase 434 808 IPR044492 -
Lja3g0141 1042 SUPERFAMILY HAD-like 451 861 IPR036412 -
Lja3g0141 1042 Gene3D - 135 335 - -
Lja3g0141 1042 Pfam Cation transporting ATPase, C-terminus 841 1016 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0141 Lja-Chr3 1477610 1482996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0141 57 1039 Primary Pumps ATPases AT3G57330 70.427 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0141 K01537 - gmx:100801260 1756.5