Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0134 ATGGGGTATCTCCATCTCTCTTGCAGAGCTGAATCCGCAGTTTCCACTTCCAATTCTCTATCAAACAAAGACAAAACCATCAAGATCCAACACTTCCAGTACACCGACCTTGAAGCCGCCACCAATGGCTTCTCCGACCGCCACCTCCTCGGCAAAGGCAGCCACGGCTACGTCTACAAAGCCATCGTCCACGGCCGTCCCGTCGCCGTCAAAAGACCCTCCAGACCTCACTCTCTTCTCCCCCGACCCATCTCCTCCTCTTCCTCTGCTCCTGCAGAGATAACCAACGAGGTTGACAACGAGATCGATATCTTGTCCAAAATTCAGAGCCCCAGGTTGGTCAATTTGGTCGGTTTCACCAATGATTCTAGGGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCCTCTGCTAGAACACCCAATTGGGGTAGGAGAATTCGTTTGGCTTTGCAAACTGCTAAGGCTATTGATACCCTTCATTCATCAACCCCACCAGTCATTCATAGAGATATTAAGTCTGCAAATGTTCTCATAGACCGCCACTATAATGCAAGGTTAGGGGATTTTGGTTTGGCTCTGATGGGTCATGTCAATGGCTACAATTTCAGGTCCACTCCACCTGCAGGCACAATGGGGTACCTTGATCCTTGTTATGTGACTCCTGATAATTTGAGCACTAAAACTGATGTGTTTAGTTTTGGGATTTTGTTGTTGGAGATTATCAGTGGAAGGAAAGCAATTGATGTTACATATTCACCACCATCAATTGTGGATTGGGCTATTCCTCTTATCAAGAGAGGGAAGTTGGTGGCGGTTTATGACCCTAGAATACCACCTCCTAAGGATCCTGTTGTGAGGAAGCAATTGGCTGTGATTGCAGCAAAGTGTGTGAGGTCTTGTAGAGAGAGAAGGCCTTCCATGAAGGAGATTGTGAATTGGCTTTGTGGGTTGTGTAAGTTGGTGCCTCTTCATTCATGGAATGGTTTCAACAACCCTTGTATGATGGTTGAGACTGTGGGGAGGCCTGTTGAAGCAAGAAAAAATGGTGAATTCGGCGCGGAGGAAGGGAATTTTGATGGTTTGGATGGTGCTAGATTGTCAAAGTCTGCAGTGAGATATTCAAGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACCTTATGGCTCACACTGAGGAGCCAGAGTTTCTAAGAGATGCTGATGGAGTAGAACACACTCAACAAAGTTCTAAACCAGCTGAGAAAGTTTCTAGCTCAAGATTTGGTAGTGGAAGATACTTCAGCAGAGGAAAAAATTTGTACCGGCCTTGTGGTGCTGATAAGGATGTGTTTGGCTTGAGTAAAGGCCAGATTGTTGGCGAGTCTTCTTCAAAACAGGATGTGGTTTCTGATTCGAATTTGAATTCTCTGGCAGCTGAGGTGATCTAG 1464 0.4617 MGYLHLSCRAESAVSTSNSLSNKDKTIKIQHFQYTDLEAATNGFSDRHLLGKGSHGYVYKAIVHGRPVAVKRPSRPHSLLPRPISSSSSAPAEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSARTPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRHYNARLGDFGLALMGHVNGYNFRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKRGKLVAVYDPRIPPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVNWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARKNGEFGAEEGNFDGLDGARLSKSAVRYSRRVYSDLGFSSNLMDLMAHTEEPEFLRDADGVEHTQQSSKPAEKVSSSRFGSGRYFSRGKNLYRPCGADKDVFGLSKGQIVGESSSKQDVVSDSNLNSLAAEVI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0134 487 SMART serkin_6 44 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0134 487 MobiDBLite consensus disorder prediction 413 432 - -
Lja3g0134 487 PANTHER OS01G0750732 PROTEIN 1 472 - -
Lja3g0134 487 Gene3D Transferase(Phosphotransferase) domain 1 133 331 - -
Lja3g0134 487 SUPERFAMILY Protein kinase-like (PK-like) 21 323 IPR011009 -
Lja3g0134 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lja3g0134 487 MobiDBLite consensus disorder prediction 418 432 - -
Lja3g0134 487 Gene3D Phosphorylase Kinase; domain 1 14 132 - -
Lja3g0134 487 ProSiteProfiles Protein kinase domain profile. 44 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0134 487 Pfam Protein kinase domain 46 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0134 487 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 472 - -
Lja3g0134 487 ProSitePatterns Protein kinases ATP-binding region signature. 50 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0134 Lja-Chr3 1395945 1398027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0134 32 323 Receptor kinase-like Gene Family AT3G59420 43.289 9.72e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lja3g0134 Pkinase 3.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0134 - - gmx:100805692 767.689