Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0095 ATGCCAGTGGCCATAACCCAATGTTCACAGAGGCTAGGAGGCCTCATATTTGAACTAGGCCTAAATTTCGTTATCTTTTTAGGGATGGTGATTGCATGCAATGCTTTGCATTACATACTAAGGCCTTTTTCACAACCTCGCATTGCTACTGACATAATTGTAGGACTAATTCTGGGCAATGTATCATTTTTACGTGGCCCATATGACAAGTTCAACAAAACCTTTGGATTTATCATTGATTTTGGCATGGTGTGTTACATGTTTGCTTTGGGTATAGAAATGGATCCTTACATACTCCTTAAAAGACCAACAAAGGATGCACAAGTTTCTTTTGCAGGAATCATCACCACATTCTTCCTTGCATGTTTCACATCCCCCCTTCTCTATTACTTCTCAGATCAACACGGTATACAATTCACCCTGGCCTTCTCAACTCTCCTCTCTAGTACAGCGTCACCGGTTCTCACACGCCTAATAACACGCCTCAAGATAGGGAAATCAGATATCGGGAAGCTTGTCATAGGAGCAGGGATGTACTCAGATTTTATATGCTCTTTTCTTCTCTCAGTTGGCTACATTTCCATGCCATTGGACACAATGTGCACTCCTTATGCAGAGAAGAATCGCATTCAGAAGTCAATCAAAATGGGGCTTGCTGTTCTTTTTCAGACTGTGTTCACAGCGCTGGTGTCACCAATATTCATCAACTGGGTTAACAATGAGAACCCTGAAGGGAAACCCATGAAAGGTTCACACTTGGTGCTGTCAATTGCCTTTATGGTCATGATTTGTGCCTCCTCAACTCTATACGCTTACACTCCAATTCTAAGTGCATTCATGACAGGGATATGGTTTCCCAGGGAGGGAAGAGTTTCCAAATGGGTTATCAGCAAAATTAACTACATGCTAACCACCCTTTTCTTTCCCATATTTTTCTTGTGGATGGGGTATGCAGCTGATTTCAGGCAGTTCCATCCTGGAGAAAAGGACACATGGATAAGATTGTTTGCATCCATTGGAATAGTAATAGGAGGTAAAGTTGTTGGAACAGTTGTTTATGGGGCTATTCTTGGCTTTCACTGGCCTGAATCAATTGCAATAGGATTGCTTCTCACCATCAAGGGACATTTTCATATCTACATGGCTATCAAAATTGGTTGTGGCACCAGCACTTCTTCCGGCATTGGATTGATTATTGCAATATTTTTCACAGTTGTGCATGCCCCCAGTGTTGTGGCACACATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACCGCATGGCCCTCCAATTGCTTGATCCATCAAGTGAGCTAAGGATACTCCTGTGTCTTCATGGACTTGAAAACGTTCCTGCTTCCATCAACTTAATGGAGATCTCAAGAGGGATAGCAGACCCTGGCATTCTGGTTTACGTCACAGAAATGATTGAACTAACTGATCAATTAACAGCCACAGCAGAGAAGGGTGAAGGAGTAGAAGCAACAACTGTAAAAGACAAGGCAGTCATTGACATGAGGGACCAAATAACAAGCTTATTTCAAGCCTATGTTGATGAGGATGGTGATGGAATCACACTCAAAAGAACAGTGGCAGTGTCAACAATCAATAACATGGCACAGGACATCTGCAATTTGGCAGAGGATTTGATGATGGCCCTCATCATATTACCCTTCCACCGGACCCAGCGCCAAGATGGAAAACTGGATGGTGGCCATCAAGGTTTCCGATACGTGAACCGAAAGTTATTGAGGAATGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGATCCATTTCAAAGATATCAAGATCTCAGGTACCGCTCAATGTGGCAACAATATTCATAGGTGGCAAAGATGACAGAGAAGCACTTGTTTATGCCAGTCGAGTAGCGCAGCACCCGGGAGTGAAGCTTACAGTTATAAGATTCCTGGTAGATACCAGTGCAGAATCATCAAGAATAGCAGCTTACAGGGTTACCCTACCAGAAGAGGATGAGTCGGGGCTGGATGATGAATGCTTTGCACAGTTCTATGAGAGACATGTAGTTGGAGGTCGAATTTCCTATACAGAGAAACATCTTGCTAATGCAGCTGAGACCTTCACTACTCTTAGATCATTTGAAGGACAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGGGTGAATTCTATATTGACAAAGGGTATGAATGACTGGCAACAGTGTCCAGAACTGGGACCAATAGGGGATGTTCTATCAGGACCAGATTTCTCAAAGACTGTCTCAGTGTTAATAATACAACAACACAAAATTAAAGGAGAACTAGATGGGCTTGATGATGAGTTCTCCATCATGTAG 2352 0.4315 MPVAITQCSQRLGGLIFELGLNFVIFLGMVIACNALHYILRPFSQPRIATDIIVGLILGNVSFLRGPYDKFNKTFGFIIDFGMVCYMFALGIEMDPYILLKRPTKDAQVSFAGIITTFFLACFTSPLLYYFSDQHGIQFTLAFSTLLSSTASPVLTRLITRLKIGKSDIGKLVIGAGMYSDFICSFLLSVGYISMPLDTMCTPYAEKNRIQKSIKMGLAVLFQTVFTALVSPIFINWVNNENPEGKPMKGSHLVLSIAFMVMICASSTLYAYTPILSAFMTGIWFPREGRVSKWVISKINYMLTTLFFPIFFLWMGYAADFRQFHPGEKDTWIRLFASIGIVIGGKVVGTVVYGAILGFHWPESIAIGLLLTIKGHFHIYMAIKIGCGTSTSSGIGLIIAIFFTVVHAPSVVAHIIKRARKRAPTHRMALQLLDPSSELRILLCLHGLENVPASINLMEISRGIADPGILVYVTEMIELTDQLTATAEKGEGVEATTVKDKAVIDMRDQITSLFQAYVDEDGDGITLKRTVAVSTINNMAQDICNLAEDLMMALIILPFHRTQRQDGKLDGGHQGFRYVNRKLLRNAPCSVGILVNRGLGSISKISRSQVPLNVATIFIGGKDDREALVYASRVAQHPGVKLTVIRFLVDTSAESSRIAAYRVTLPEEDESGLDDECFAQFYERHVVGGRISYTEKHLANAAETFTTLRSFEGQYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLIIQQHKIKGELDGLDDEFSIM* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0095 783 Pfam Sodium/hydrogen exchanger family 27 415 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja3g0095 783 Gene3D - 458 736 - -
Lja3g0095 783 PANTHER CATION/H+ EXCHANGER 3 4 781 - -
Lja3g0095 783 Gene3D - 22 425 IPR038770 -
Lja3g0095 783 PANTHER CATION/H + ANTIPORTER 4 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0095 Lja-Chr3 1020575 1024928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0095 18 783 Antiporter Super Family AT3G52080 50.446 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0095 - - gmx:100815945 1154.81