Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0068 ATGAAACCTTTCCTTTTCTTTCTCACATTCACATTCTTTTGCTGCCAAACACACCTAGTTAACTCTGCTGCTACAACAATTCTGCCCCTCCAACTCATCACCTTGCTCTCCATAAAGTCCTCCCTCATAGACCCTCTCAAGAACCTCCATGACTGGGACCCCTCCTCCACCTTCTCCTCCAACTCCAATTACCAAGACCCAATTTGGTGTTCATGGAGAGGCGTCACATGCCACTCGAAAACAGCACAAATCACCTCCTTAGACCTCTCTAACCTCAACCTTTCAGGCACAATTTCAGGCCAAATCCAACACCTATCATCCTTGAACCACTTGAATCTCAGTGGGAATAACTTCGGTGGAACTTTCCAAGTAGCAATTTTTGAACTTGCCCAGCTTAGGATTCTAGACATTAGCCACAACTCCTTCAACTCAACCTTCCCACCCGGAATATCCAAGTGCAAGTTTTTGAGGGTCTTCAATGCTTACAGCAACAGCTTCACTGGCCCTCTACCTCAGGAACTAACCAGGCTCAGGTTCCTGGAACAGCTCAACCTCGGAGGAAGTTACTTCAAGAGAAGCATTCCACCAAGTTATGGCACCTTCCCTAGACTCAAGTTCCTATATTTGCACGGTAACCTATTAGAAGGTCCACTACCACCCCAACTAGGACAGTTATCAGAGCTACAACACTTGGAAATTGGATACAACCCATCATACTCAGGAACACTGCCAGTAGAATTGTCAATGCTGTCCAATTTAAAGTACTTGGATATTTCAGCTTCTAACATCTCAGGACCCTTGATCTCAGAACTTGGGAACTTGACCATGCTTGAAACACTGTTGCTCTTCAAGAATCACTTCACTGGTGAAATCCCATCAACCATAGGCAACTTGAAATCCCTGAAAGCTCTTGATTTGTCAGACAATGAACTCACAGGGCCAATTCCATCACAAGTTTCCATGCTGAAGGAACTAACCATACTGAGCCTCATGGACAACAAGCTAACAGGTGAAATACCACAGGAAATTGGAGACTTACCAAACCTTAACACTCTCAATCTCTTCAACAACTCACTCACAGGAACCCTGCCACAACAATTAGGCTCCAATGGGTTGCTATATAAACTAGACGTCTCCACAAACTCACTCCAAGGTCCAATTCCTGCAAATGTGTGCAGAGGCAACAACCTAGAGAAGCTCATCCTCTTCAACAACAAATTCAGCAACATTCTTCCGCCATCCCTTTCCAACTGCGCCTCACTCACCAGAGTTCGCATCCAAAACAACCACCTCAATGGTTCCATCCTTCCAGAGCTCACCCTCCTCCCTAACCTCACTTTCCTTGACATTAGCAACAACAACTTCCAAGGTCAAATTCCTCCACAACTTGGGGACAACCTTCAGTACTTCAACATCTCCGGTAACTCCTTCCAAAGTCACTTACCCAGTAACATATGGAACGCGAGCACCCTTCAGGTTTTCTCCGCCGCGTCGGCGAAGATCACCGGCGAGATTCCCGATTTCATAGGGTGCCAGACGATTTACAACATTGAATTGCAGGGGAACTCCATGAACGGTAGCATCCCTTGGGACATTGGTCATTGCCAGAAGCTGATTCGTCTGAATCTGAGCAGAAACTCGCTCACCGGAATCATCCCTTGGGAAATCTCGACCCTCCCTTCCATCACCGACGTCGATCTCTCCCACAACTCCCTCACCGGAACCATACCTTCCAACTTCAACAACTGCTCCACTCTCGAGAATTTCAACGTCAGCTTCAACTCCCTCACCGGCCCCATTCCTTCCTCCGGCATCTTCCCCAGCCTCCACCCTTCCTCCTACTCCGGCAACCAGGACCTATGCGGCCACCTCCTCGCCAAGCCCTGCGCCGCCGGAGAGAACGAGCTCGAACACAACCGCCAGCAGCCGAAGCGGACCGCCGGCGCAATCGTGTGGATCGTCGCGGCGGCGTTCGGGATCGGCCTCTTCGCTCTCATCGCCGGAACCCGCTGCTTCCACGCCAACTACAACCGCCGGTTCGCCGGCAGTGACGGCAACGAGATCGGACCGTGGAAGTTAACGGCGTTTCAGCGGTTGAATTTCACGGCGGAGGACGTGCTAGAATGCTTGTCCATGTCAGATAAAATCTTAGGGATGGGGTCCACTGGAACTGTTTATAGAGCGGAGATGCCAGGTGGCGAGATCATAGCCATTAAAAAGCTTTGGGGGAAGCACAAGGAAGGCATCATCCGACGGAGGATAGGGGTTCTGGCTGAGGTGGATGTATTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAAAGCACGATGCTGCTGTATGAGTACATGCCGAATGGGAACCTTGATGATTTGCTGCATGGGAAGAATAAAGGAGATTATCATAACGTGGTTGGTGCTGATTGGTTCACTAGGTATAAGATTGCACTGGGTGTGGCACAGGGAATCTGCTACCTTCACCATGACTGTGATCCAGTCATCGTGCATAGGGATCTGAAACCTAGTAACATTTTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTTGGGGTTGCCAAGTTGATTCAAACGGATGAGTCCATGTCTGTAATTGCTGGATCCTATGGTTACATTGCTCCAGAATATGCTTACACACTTCAAGTTGATGAGAAGAGTGATATTTACAGCTATGGGGTGGTGTTGATGGAGATTTTATGCGGAAAACGTTCGGTGGATGCAGAATTTGGCGATGGAAACAGCATTGTGGACTGGGTTAGGTCCAAGATCAAGAACAAAGATGGCGGCATTGATGATGTGTTGGATAAGAATGCCGGGGCCGGGTGTGCTTCCGTAAGGGAGGAGATGATACAAATGCTTAGGATTGCATTGCTCTGCACAAGCAGAAACCCTGCAGATAGGCCTTCCATGAGAGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTGATAGTGTTGTTGTAGGTAGTGACAATGTTGTGGGTAGTGGCGGTGGTGGTGATATTCCTTTGCCACAAAAGCCAATTGTGGAAAGCTGA 3093 0.4876 MKPFLFFLTFTFFCCQTHLVNSAATTILPLQLITLLSIKSSLIDPLKNLHDWDPSSTFSSNSNYQDPIWCSWRGVTCHSKTAQITSLDLSNLNLSGTISGQIQHLSSLNHLNLSGNNFGGTFQVAIFELAQLRILDISHNSFNSTFPPGISKCKFLRVFNAYSNSFTGPLPQELTRLRFLEQLNLGGSYFKRSIPPSYGTFPRLKFLYLHGNLLEGPLPPQLGQLSELQHLEIGYNPSYSGTLPVELSMLSNLKYLDISASNISGPLISELGNLTMLETLLLFKNHFTGEIPSTIGNLKSLKALDLSDNELTGPIPSQVSMLKELTILSLMDNKLTGEIPQEIGDLPNLNTLNLFNNSLTGTLPQQLGSNGLLYKLDVSTNSLQGPIPANVCRGNNLEKLILFNNKFSNILPPSLSNCASLTRVRIQNNHLNGSILPELTLLPNLTFLDISNNNFQGQIPPQLGDNLQYFNISGNSFQSHLPSNIWNASTLQVFSAASAKITGEIPDFIGCQTIYNIELQGNSMNGSIPWDIGHCQKLIRLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPSLHPSSYSGNQDLCGHLLAKPCAAGENELEHNRQQPKRTAGAIVWIVAAAFGIGLFALIAGTRCFHANYNRRFAGSDGNEIGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAIKKLWGKHKEGIIRRRIGVLAEVDVLGNVRHRNIVRLLGCCSNRESTMLLYEYMPNGNLDDLLHGKNKGDYHNVVGADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILCGKRSVDAEFGDGNSIVDWVRSKIKNKDGGIDDVLDKNAGAGCASVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVVVGSDNVVGSGGGGDIPLPQKPIVES* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0068 1030 Pfam Protein kinase domain 714 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0068 1030 Gene3D Phosphorylase Kinase; domain 1 692 790 - -
Lja3g0068 1030 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 1015 - -
Lja3g0068 1030 SMART LRR_typ_2 442 466 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 105 124 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 346 370 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 129 153 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 298 322 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 201 225 IPR003591 -
Lja3g0068 1030 SMART LRR_typ_2 559 582 IPR003591 -
Lja3g0068 1030 SUPERFAMILY L domain-like 315 621 - -
Lja3g0068 1030 Pfam Leucine rich repeat 83 141 IPR001611 GO:0005515
Lja3g0068 1030 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 1015 - -
Lja3g0068 1030 Pfam Leucine rich repeat N-terminal domain 31 77 IPR013210 -
Lja3g0068 1030 SMART serkin_6 711 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0068 1030 SUPERFAMILY Protein kinase-like (PK-like) 714 991 IPR011009 -
Lja3g0068 1030 Gene3D Ribonuclease Inhibitor 325 638 IPR032675 -
Lja3g0068 1030 Gene3D Transferase(Phosphotransferase) domain 1 791 1007 - -
Lja3g0068 1030 Pfam Leucine Rich Repeat 537 558 IPR001611 GO:0005515
Lja3g0068 1030 Gene3D Ribonuclease Inhibitor 32 321 IPR032675 -
Lja3g0068 1030 ProSiteProfiles Protein kinase domain profile. 711 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g0068 1030 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Lja3g0068 1030 SUPERFAMILY RNI-like 86 408 - -
Lja3g0068 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0068 Lja-Chr3 777481 782272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0068 3 999 Receptor kinase-like Gene Family AT1G08590 42.371 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja3g0068 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0068 - - gmx:100809695 1596.25