Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0036 ATGGCTTCTTCTAATGGTGGTGTTCCTCCGGGATTTCGATTTCATCCAACGGATGAAGAGCTTCTTCATTACTACTTGAAGAAGAAGGTGTCCTTTCAAAAGTTTGACATGGATGTTATTAGGGAGGTGGACTTGAACAAGATGGAGCCTTGGGACTTACAAGAAAGATGTAAAATTGGATCAACCCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGACAGAAAGTACCCTACAGGGTCAAGGACCAATAGGGCAACAAACGCAGGGTTTTGGAAAGCTACCGGCAGAGACAAGTGCATACGAAATAGCTACATGAAGATTGGAATGAGAAAAACTCTTGTTTTCTACAAAGGCAGGGCTCCTCATGGACAAAAGACTGATTGGATCATGCACGAGTATCGCCTTGAAGATGCAAATGATCCTGAAGGAAATACCAATGAAGATGGGTGGGTGGTGTGCAGGGTGTTTAAGAAGAAGAACTTATTCAAGATTGGAAATAATGAAGGTAGCTCCGCTCACAATTCAGAGCAACCAATCAACAACTCCTCAGGAGCCAATGCCCGCTCTTTCATGCACAGGGACAACCAATACTTGCTACTACAACAACAAAACACTAGGAACCCATCAGGGTTTGAGCTGGATAAACCTGAGCTTGGTCTTCATCACTATCCACACTTGCAAAACCAACCTCAATACGCACTTTTCCAATCCCAACAACCTCTTCTTCAGAGCCACAAACCAATGGTTTACAATGACTATTCTTATGCATCATCTCTACCCTCAGATCCCCCTCTCAAGCAGCTCATGACAAACCCTAGAGATTGTGAGAGTGGTAGTGATGGCCTGAGATACCAAGTTTCAGAATCCGGTATGGAAGTCGGCTCGTGTGAACCGCCTCAAGAAATGGGTGGTGGAAGAGGTGAAGGAATGAATGAATGGGGGGTGCTTGATAGGCTAGTGACTTCTCATCTTGGAAATGAAGACTCAACTAAAGAGGTCAGGTTTGATGATGCAAACCCACAATCTGTCCACCAAATCAACCAACTTTCTTTGCGGGGAGAAATGGACTTTTGGGGCTATGCAAAACAATGA 1095 0.4438 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYMKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDANDPEGNTNEDGWVVCRVFKKKNLFKIGNNEGSSAHNSEQPINNSSGANARSFMHRDNQYLLLQQQNTRNPSGFELDKPELGLHHYPHLQNQPQYALFQSQQPLLQSHKPMVYNDYSYASSLPSDPPLKQLMTNPRDCESGSDGLRYQVSESGMEVGSCEPPQEMGGGRGEGMNEWGVLDRLVTSHLGNEDSTKEVRFDDANPQSVHQINQLSLRGEMDFWGYAKQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0036 364 PANTHER PROTEIN BEARSKIN2-LIKE 5 331 IPR033519 -
Lja3g0036 364 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lja3g0036 364 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lja3g0036 364 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lja3g0036 364 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Lja3g0036 364 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0036 Lja-Chr3 436324 439050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0036 1 360 NAC Transcription Factor Family AT1G33280 54.795 4.57e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lja3g0036 NAM 5.2e-37 No_clan