Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0006 ATGGGAGAAATCATGGGAATATCATCATCATCAATAACAACAATTGGTGTAATTAGCAGTGTGATTGCTACGGTGGTGATATGGTGGATTTGGAGCGCACTGAACTGGGTGTGGCTGAGACCAAAGAGGATAGAAAGAGCTATGAAGCAGCAGGGTCTCCAAGGCAATTCCTACCGCCCTTTGGTTGGAGACATAAGAGATATGGTTAAGATGATCAAGGAAGCCAAATCCAAACCCATGGATCCCTACTCTAACGACATTGCACCTCGTGTATTGCCTTTCGTTGTCCACACCATCGCTAAATACGGGAAGAATTCATTTATGTGGCTTGGACCAAGACCGAGGCTTTTCATCATGGACCCAGACAAAATTAAAGAAATCGCTAATAAGGTCTATGAATTTCAAAAGCCCGACACCAGTCCTCTGTTCAAGCTTCTAGCATCGGGCTTTGCAAATTACGATGGTGACAAATGGGCAAAACACCGAAAGATAGTCAGCCCAGCATTCAATGTAGAGAAACTCAAGCTCTTGGGACCGATATTTTGCGAGTGTTGCGATGATATGATCAGCAAATTGGAGAGTGTAGTAGCTTCATCTAACGGGTCATGTGAGTTAGATATATGGCCTTTCGTCCAAAACGTTTCAAGCGACGTCCTCGCTCGTGCTGGCTTTGGAAGTAGCTATGAAGAAGGAAAAAAAGTATTCCAACTTCAAAGGGAAATGCTTCAACTTACAATGACACTTTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCTACATACACCAATAGGAGGATGAAAGCAATTGACAAGGAAATACGAGGTTCACTTATGGCTATCATCAACCGCAGATTAAAAGCAATCAAAGCAGGGGAACCTACTAACAATGACTTGTTAGGCATACTTTTGGAATCAAATTACAAGGAATCTGAAAAAAGCAGTGGTGGTGGAGGAATGAGTTTAAGGGAAGTAGTGGAAGAAGTGAAGCTATTTTACTTGGCAGGGCAGGAAGCCAATGCAGAATTGCTGGTTTGGACTTTGTTATTACTCAGTAAGCATCCTGATTGGCAAGCAAAGGCGAGGGAGGAAGTTTTTAAAGTGTTCGGTAATGAAAAGCCAGATCATGATAAGCTAGGTCAACTTAAAATTGTGTCAATGATCCTACAGGAGAGCCTCAGATTATATCCACCAGTTGTTATGTTCGCCCGATATCTTCGTAAGGATACAAAACTTGGGGACCTTACAATTCCTGCAGGAGTGGAGATTATAGTACCTGTGTCAATGCTACATCAAGAAAAGGAGTTTTGGGGCGACGATGCCATGGAGTTCAATCCAGAAAGATTCTCTGAAGGGGTCTCAAAGGCAACAAAAGGCAAAGTTTGTTACATTCCATTTGGATGGGGTCCTCGACTTTGCATTGGACAAAACTTTGGCTTGTTAGAAGCAAAAATAGCTTTGTCCATGATCCTGCAACATTTCTCCCTCGACCTTTCCCCTTCCTATACTCATGCTCCTTCCTTTATTATCACTCTTCAGCCTGATCGCGGGGCTCATCTCATTTTACATAAACTCTAG 1581 0.4269 MGEIMGISSSSITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGDIRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKIKEIANKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCECCDDMISKLESVVASSNGSCELDIWPFVQNVSSDVLARAGFGSSYEEGKKVFQLQREMLQLTMTLFKFAFIPGYRFLPTYTNRRMKAIDKEIRGSLMAIINRRLKAIKAGEPTNNDLLGILLESNYKESEKSSGGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSKHPDWQAKAREEVFKVFGNEKPDHDKLGQLKIVSMILQESLRLYPPVVMFARYLRKDTKLGDLTIPAGVEIIVPVSMLHQEKEFWGDDAMEFNPERFSEGVSKATKGKVCYIPFGWGPRLCIGQNFGLLEAKIALSMILQHFSLDLSPSYTHAPSFIITLQPDRGAHLILHKL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0006 526 Pfam Cytochrome P450 100 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 SUPERFAMILY Cytochrome P450 90 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 Gene3D Cytochrome P450 37 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Lja3g0006 526 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 15 524 - -
Lja3g0006 526 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 524 - -
Lja3g0006 526 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g0006 526 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0006 Lja-Chr3 151165 153480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0006 2 526 Cytochrome P450 AT3G14690 52.381 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0006 - K24179 gmx:100801959 906.36