Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3522 ATGGACGAAGAAGTAGATCAGCCACTTCGTCTCCCTGATTACGTTGGTCCAATTCAAGACATGGGAAAGGTGTTGGTAACCGTTACAGGCTACCATGGCTTGGAGCGTTTCAACCTCATCAAGTTGATTGCATACGCAGGTTCTTCTTATAGCGGTAGAATGGCGGAATTCATAAATCACCTTGTCTGCTTCAAGTTCGAAGGAAGGAAATACGAGATTGCTAGAAGGCTCAAAATACCCATAGTTAACCACCGTTGGATTGAAGATTGCTTAAGGGAACGAACACGCCTTCCAGTAGATTCTTACATGTTGCAAAGTGGACATGAAGTAGGGCCATTGTCTCTGCGAGTTCCGGAAACCTTTGGACCAAAACAGTGGCTTATTCAATCCACCAACCTCAATTCTGAACCTTTCGGTCCTGTTTTGGAAGATTCAGAGATACTGCTCATATATGAGCATCAGGAGAGGCCAGGGAAAGGAAAAAGAACTATTTGCAGTGATAGTGGAGTTAGTATTGCGGCTGGGAAATCTTGCAAAGAAAGAAGAACGGATACCCTGAACACCAAAGATGGTGCTATCTCTTGCCTTTCTGGTGGTGTCACTATTGACTATCTTCCAGATAATAGTAGTTCTGGACCTGATGATGGCATATTTAATAAAAAAAGATCAACCACTGGTGGTTCAGATGAGAATGAGCTGATCAAATCTACAACTTTGTTTGTTGAAGATACCCCACTTGTGCCACAGACTTCAATAGATAGAAGTTCTAGGGCTGAAAAGTCCAAAGATTGTGATCAGAAAATTGAGCATGCAGCCACCACTGATCAAAAGTTATGCTCCCTGACAATCCCATGTTACAATTTGGCCTCAGGTACTTTGGTCCCTATGGATCAAGAGTTGCCAGATTCTAATCCTATAGTCCGAGAGCATAGTGGAATCCATCACCATCATCATGAAAATCAACTAAGAGAACCAGCACATTAA 984 0.4268 MDEEVDQPLRLPDYVGPIQDMGKVLVTVTGYHGLERFNLIKLIAYAGSSYSGRMAEFINHLVCFKFEGRKYEIARRLKIPIVNHRWIEDCLRERTRLPVDSYMLQSGHEVGPLSLRVPETFGPKQWLIQSTNLNSEPFGPVLEDSEILLIYEHQERPGKGKRTICSDSGVSIAAGKSCKERRTDTLNTKDGAISCLSGGVTIDYLPDNSSSGPDDGIFNKKRSTTGGSDENELIKSTTLFVEDTPLVPQTSIDRSSRAEKSKDCDQKIEHAATTDQKLCSLTIPCYNLASGTLVPMDQELPDSNPIVREHSGIHHHHHENQLREPAH* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3522 327 Pfam twin BRCT domain 25 86 IPR001357 -
Lja2g3522 327 SUPERFAMILY BRCT domain 19 105 IPR036420 -
Lja2g3522 327 SMART BRCT_7 15 94 IPR001357 -
Lja2g3522 327 MobiDBLite consensus disorder prediction 206 230 - -
Lja2g3522 327 ProSiteProfiles BRCT domain profile. 26 104 IPR001357 -
Lja2g3522 327 Gene3D BRCT domain 19 109 IPR036420 -
Lja2g3522 327 PANTHER F5A8.9 PROTEIN 17 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3522 Lja-Chr2 83249591 83253446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3522 42 110 Core DNA Replication Machinery Family AT4G02110 45.070 1.95e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3522 - - lja:Lj0g3v0315339.1 547.74