Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3521 ATGGCGTTTTGGGGAATTGAAGTAAAACCCGGAAAGCCCTTTACTCACAAATGCGATGACTCCAAAGGTCGCCGCCTCCACATTTCGATGGGCACTTTGGGGTTTGGCACTGCAAACGCAAAAAGCACGTTGCAGTGTAATGTGGGAGATAAGAGCCCTGTGTACGTGTGCTCTCTCTACCCTGGACACACCGAGTCATTGCAACTCAATTTCGAGCTCCACGAAGTTGAAAATGTTACTTTCTCTGTTATTGGCCCTCGCAGTATTCATCTCTGCGGTTATTATCTTGCCCCTGCCCCATATACCAATGTCGCTGATGATTCGGAATCATATGGGGTAGATATTGCAAACACAGAGTCAGAGAAATCTGGGAACAATGATGAAGATGATGACACCTATGAGGATAGTTTTATTGATGATGACAATGATCCAGAAGTTTTTCCACCTTCTCCTATTTCCAACAAAGAGGGAGCTTCTTTTGATAGCAGATCAAAAGGTAGGAAAGGCAGCCGTAGACGGCTGAGGAAGAAGTACCAGACAGTGGGTTCCGATGATGAAAACAGTTTGCATGACCAATTCAAGGATATTGATAATGAAGACATCCTGCCTATTTCATCTTTTTACAAGAATAAAGCCTCTGGAAGGGCCTCAGACCAGGAAATGGATGATAGTGTTGATAAAGGAGCAGGTGATGCTGGTAAAGATGGTGGAAATACTATTACCAAAACAGATTGTGAAACTGACACTGATAATCGGAAATGCGTGTCTAGGTGTCTCTTCTCAACTGAGACCATTCAGATGCCTAGGGAAGCTGTACTATCAAACAACTTGGTAGGTCCTTGCAATGGTCTGGATGTTGGTGATGTAAACAATTTAAAATCAAAGGGGAAGGAAGAAGAGAATGAAACACAACAGTATCATAGTGATGATAAGGAAACTGAAACTATGATTGAAATACTACCTTCTGCTGAGGTCGGTCAAGGACAGGATGAAAAACCAAAGAAAAAAAGGAAAGGCTGTTCAAAGGAGGAAACGTTTGTTATTGCTTATCGTAATAAGCATCCAGATGAGAACAATGATCAGGATACAGTTAACGAGGATGTTAAGATCTCAGCAATTGTTGCATTGCCCTACGTTGAAATGGACCGAGATAAGACGCCTAAGAGGAAAAAGAAGGAGAAGGAAAACAAAGATTCACATCTTGAAGGTAACAATGAATGCCATGAAGATATTAGCCAAGATGACAAAGGAGATCCAAAAGAGTCCGATAATCTGATTCATAAGATTCCTGAAGGAACGGATGAAAAGACTGTAGACGATGGTGCTCTTGACTTTCCTGATGGAAATCAGTCTGAGGATAGAAAAGTCAAGAAAAGGAAAAAGAAGAGTAGAAGTCAGGGGGAAGTTGTAAATTCTGATATGCCTGTATCTGTTGAGCAGAGTAATGAGATGCTGAAAGAGGATGGAAACAAGATAGCTGATGCAAAGCCTTCCCAAGTAAGAACATTGTCAAATGGACTTGTTATTCAAGAGCTAGAGACTGGGACAAAAGATGGCAAAATTGCTGCATTAAGGAAAAAGATCAGCATCAATTACACTGGAAAGCTGAAAGAAAGTGGGGCAGTATTTGAGTCAAATGCTGACCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATAAAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAGTTGGAGAAAAAAGAAGAGTTGTAATTCCACCATCAATGGCGTTTGGGAGTGATGGACACGGTGCCACAATACCACCAGATTCTTGGTTGGTGTATGATTTCGAGCTGGTTAAAGTGTACTGA 1842 0.4186 MAFWGIEVKPGKPFTHKCDDSKGRRLHISMGTLGFGTANAKSTLQCNVGDKSPVYVCSLYPGHTESLQLNFELHEVENVTFSVIGPRSIHLCGYYLAPAPYTNVADDSESYGVDIANTESEKSGNNDEDDDTYEDSFIDDDNDPEVFPPSPISNKEGASFDSRSKGRKGSRRRLRKKYQTVGSDDENSLHDQFKDIDNEDILPISSFYKNKASGRASDQEMDDSVDKGAGDAGKDGGNTITKTDCETDTDNRKCVSRCLFSTETIQMPREAVLSNNLVGPCNGLDVGDVNNLKSKGKEEENETQQYHSDDKETETMIEILPSAEVGQGQDEKPKKKRKGCSKEETFVIAYRNKHPDENNDQDTVNEDVKISAIVALPYVEMDRDKTPKRKKKEKENKDSHLEGNNECHEDISQDDKGDPKESDNLIHKIPEGTDEKTVDDGALDFPDGNQSEDRKVKKRKKKSRSQGEVVNSDMPVSVEQSNEMLKEDGNKIADAKPSQVRTLSNGLVIQELETGTKDGKIAALRKKISINYTGKLKESGAVFESNADQAPFKFRLGKGEVIKGWDVGLEGMRVGEKRRVVIPPSMAFGSDGHGATIPPDSWLVYDFELVKVY* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3521 613 MobiDBLite consensus disorder prediction 215 230 - -
Lja2g3521 613 PANTHER PEPTIDYLPROLYL ISOMERASE 1 260 - -
Lja2g3521 613 MobiDBLite consensus disorder prediction 381 475 - -
Lja2g3521 613 PANTHER PEPTIDYLPROLYL ISOMERASE 355 612 - -
Lja2g3521 613 MobiDBLite consensus disorder prediction 177 194 - -
Lja2g3521 613 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 525 613 IPR001179 GO:0003755
Lja2g3521 613 MobiDBLite consensus disorder prediction 289 341 - -
Lja2g3521 613 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 523 610 IPR001179 GO:0003755
Lja2g3521 613 MobiDBLite consensus disorder prediction 211 247 - -
Lja2g3521 613 Gene3D - 476 613 IPR046357 GO:0003755
Lja2g3521 613 SUPERFAMILY FKBP-like 484 612 - -
Lja2g3521 613 MobiDBLite consensus disorder prediction 291 317 - -
Lja2g3521 613 MobiDBLite consensus disorder prediction 381 454 - -
Lja2g3521 613 MobiDBLite consensus disorder prediction 117 194 - -
Lja2g3521 613 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Lja2g3521 613 MobiDBLite consensus disorder prediction 124 142 - -
Lja2g3521 613 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 260 - -
Lja2g3521 613 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 355 612 - -
Lja2g3521 613 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3521 Lja-Chr2 83221417 83227296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3521 528 610 Calmodulin-binding Proteins AT5G48570 46.429 2.89e-17 83.6