Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3480 ATGACCAAACCTAGCAGTACTAGTCTGAACCACACTTCCTCCCAGTCCCACATGGCTGAAGCCACAGGAAACTTGTTTTCCTTCACCATCTTCCTCTTTCAACACATCCAAACCTTGGAGATCATCATTGCAGCCATGGTGTTCATAGCAATTCATTCTTTGAGTTCAAAGAAGCATCATGGCCTACCCATTTGGCCTTTCCTTGGAATGCTACCTTCCTTGCTCACAGGACTAAGAACCAACATGTATGAGTTTCTCACAGATATTCTGAACCATCAAAATAGAACCTTTACATTCAGAGGGCCTTGGCTCACAGACCTCAACTGCATCATTACCTCTGATCCTCAAAACATAGAGCATCTTCTCAAGACAAATTTCACTTTTTTCCCAAAAGGAAAATACTTCAGGGACACAGTTTCTGATCTTCTTGGAGATGGGATTTTTAGTGCTGATGATGAGACATGGCAGAGGCAGAGGAAGACAGCAAGCATTGAATTCCACTCCTCAAAGTTCAGGAAACTAACAAATGAGTCACTCTTTGAGCTTGTTCACAAGAGGCTCATACCTGTGTTGGAATCATCTGTTCACAAATCAATTGCCATAGATCTCCAAGATATCTTGTTAAGGCTCACTTTTGATAATGTGTGCATGATAGCTTTTGGTATCGATCCTGGCTGTTCACAGCCACATTTACCTGATATTCCATTTGCCACAGCCTTTGAGGATGCAACTGAAGCAACTGTGTTGAGATTTGTAACCCCTGCATGCCTTTGGAAGGCCATGAGGTTTCTCAACTTGGGAATGGAGAGAAAGCTAAAGAAATCAATACAGAAAGTTAATGAGTTTGCTGAGAATGTTATCAGGACAAGAAAGATGGAACTCTCTCTTTGCAATTACAATGAGCAAAAATCAGATTTGTTAACTGTGTTCATGAGGCTCAAGGATGAGAGTGGAAAACCATATTCAGACAAGTTCTTGAGGGATATATGTGTGAATTTCATATTAGCAGGAAGGGACACTTCTTCTGTTGCTTTGAGCTGGTTTTTCTGGTTGGTTGATCAGAATCCTGAAGTGGAGGAAAGAATACTAGAAGAGATTTACAGGGTGGTGAGCCAGAGGGAGGGAATCAAGAAGGAAGAGTTGGGAAATTCTTTGACATTTAGACCAGAGGAGATTAAAAAGATGGAATATTTGCATGCTGCTCTTTCAGAAGCTTTAAGATTATATCCTTCTGTGCCTATGGATCACAAGGAGGTGGTGGAAGATGACATTTTCCCAGATGGGACAGTCCTAAAGAAGGGAACAAAAGTGATCTATGCAATTTATGCAATGGGAAGAATGGAGAGCATATGGGGAAAGGACTGCAAGGAGTTCATGCCAGAAAGATGGTTAAGAGACGGGCGTTTCATGAGTGAGTCTGCCTACAAATTCGCTGCTTTCAATGGCGGACCTCGCTTGTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGCTGCAGCCAGCATCATCTTCCGCTACCGCGTGAAGGTGGTGGAGAACCACCCTGTGGTGCCAAAGCTTGCTTTGACTCTCTACATGAAGCATGGGTTGAGAGTTAACCTTCACAGGCGTCATGAAGCAGATCTTCAAAAATACTTCAAGTTTAGTTAA 1656 0.4239 MTKPSSTSLNHTSSQSHMAEATGNLFSFTIFLFQHIQTLEIIIAAMVFIAIHSLSSKKHHGLPIWPFLGMLPSLLTGLRTNMYEFLTDILNHQNRTFTFRGPWLTDLNCIITSDPQNIEHLLKTNFTFFPKGKYFRDTVSDLLGDGIFSADDETWQRQRKTASIEFHSSKFRKLTNESLFELVHKRLIPVLESSVHKSIAIDLQDILLRLTFDNVCMIAFGIDPGCSQPHLPDIPFATAFEDATEATVLRFVTPACLWKAMRFLNLGMERKLKKSIQKVNEFAENVIRTRKMELSLCNYNEQKSDLLTVFMRLKDESGKPYSDKFLRDICVNFILAGRDTSSVALSWFFWLVDQNPEVEERILEEIYRVVSQREGIKKEELGNSLTFRPEEIKKMEYLHAALSEALRLYPSVPMDHKEVVEDDIFPDGTVLKKGTKVIYAIYAMGRMESIWGKDCKEFMPERWLRDGRFMSESAYKFAAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVVENHPVVPKLALTLYMKHGLRVNLHRRHEADLQKYFKFS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3480 551 SUPERFAMILY Cytochrome P450 61 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PANTHER CYTOCHROME P450 86B1-LIKE 26 541 - -
Lja2g3480 551 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS E-class P450 group I signature 487 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS E-class P450 group I signature 477 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 Gene3D Cytochrome P450 56 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 Pfam Cytochrome P450 62 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 480 489 IPR017972 GO:0005506|GO:0016705
Lja2g3480 551 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS P450 superfamily signature 478 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS P450 superfamily signature 487 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3480 551 PANTHER CYTOCHROME P450 26 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3480 Lja-Chr2 81931413 81935890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3480 25 548 Cytochrome P450 AT5G23190 70.095 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3480 K15402 - gmx:100809503 844.343