Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3474 ATGGACACAATCAGCTGCATCTTGCTATTTCTCCTTACCATCACCTTTATACTGTTTCTTGCCAATACAATCTTGAAACCAAACCACAAGAAGAAGAAGCTTCCACTTCCCCCAGGACCAAAGGGTCTTCCCATAGTTGGGAACCTCTTCCAACTTGGCCACAAACCCCATCAAACCTTGGCCACTCTCTCCAAAACCCATGGCCCCATCATGACCCTCAAACTTGGCCAAATCACTACCATAGTCATGTCCTCCTCCGAAACTGCCAAATCAACGCTCCAAATCCACGACAATTTCTTATCCAACAGAAAGATCCCCGATGCCATGAAAGGCTATAACCAAGACCACCTCCGGAAAATCTGCAACAATCTATTATTCTCCAACAAGAATCTCAATGCTAATGAACAATTAAGATGCGACAAGATTTTAGAGCTCTTCAATGACATCAAGAAAAGCATGTTGAAAGGTGAGGCCGTTAATGTTGGAAGGCTGGCTTTCAAGACCACCATAAACTTGCTTTCAAACACGATTTACTCAGTGGATTTGATTCGCTCTGCGGATAAAGCTGGGGAGTTTAAGGAGGTGATTGTGAGTATCATGAAGGAGGTTGGGAGGCCCAACTTGGCTGATTGTTTTCCGGTGTTGAAGGTGGTTGATCCTCATGGGATAAGGAGGCGCACAGGGAGTTACTTTGAGAGGTTGATGAAAATTTTCAAGGGATTGGTGGAGGAAAGGTTGAAGCAGAGGAAAGAGAGTGGTTACAACACCAAAAATGACATGTTGGATGCCATGCTCGACAATGCTCAACATAACGGTTCAGAGATGTACAAAGATAAGATTGAGCGTTTATCAGTGGACCTATTTGTGGCAGGAACCGACACAGTTACATCTACGGTAGAATGGACAATGGCCGAGTTACTACGTAACCCAGAAGTTATGTCAAAAGCAAAATCAGAGTTGGAGAAAACTATTGGCAAAGGCAAGCTAGTTGAAGAATCACACATTGAGAGACTCCCTTACTTGCAAGCAATTGTTAAAGAGATTTTTCGGTTGCACCCAGCAGTCCCACTTTTACTCCCTCGACAAGCCGAAGTAGATTTAGATATGCACGGTTATACGATCCCGAAAGGTTCACAAGTTCTGGTTAATGTATGGGCTAATGGGAGAGATCCAAATTTATGGGATAATCCAAATTTGTTTTCACCAGAGAGATTCTTGGGGTCAGAAATTGACTTTAAGGGTAGAAGTTTTGAGTTGACACCATTTGGCGCTGGGAGAAGAATATGTCCTGGCTTACCATTGGCAATAAGACTGTTGTTCTTGATGTTGGGTTTGCTTATCAATTGCTTCAATTGGGAGCTTGAAGGTGGAATCAAACCAGAGGATATGGATATGGATGAAACATTTGGACTTACCTTAGAAAAGACTCAACCAGTCCTGGCGGTTCCAACCAAAACAACTAATTGA 1467 0.4315 MDTISCILLFLLTITFILFLANTILKPNHKKKKLPLPPGPKGLPIVGNLFQLGHKPHQTLATLSKTHGPIMTLKLGQITTIVMSSSETAKSTLQIHDNFLSNRKIPDAMKGYNQDHLRKICNNLLFSNKNLNANEQLRCDKILELFNDIKKSMLKGEAVNVGRLAFKTTINLLSNTIYSVDLIRSADKAGEFKEVIVSIMKEVGRPNLADCFPVLKVVDPHGIRRRTGSYFERLMKIFKGLVEERLKQRKESGYNTKNDMLDAMLDNAQHNGSEMYKDKIERLSVDLFVAGTDTVTSTVEWTMAELLRNPEVMSKAKSELEKTIGKGKLVEESHIERLPYLQAIVKEIFRLHPAVPLLLPRQAEVDLDMHGYTIPKGSQVLVNVWANGRDPNLWDNPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAIRLLFLMLGLLINCFNWELEGGIKPEDMDMDETFGLTLEKTQPVLAVPTKTTN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3474 488 Pfam Cytochrome P450 37 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 486 - -
Lja2g3474 488 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 486 - -
Lja2g3474 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Lja2g3474 488 Gene3D Cytochrome P450 24 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3474 488 SUPERFAMILY Cytochrome P450 31 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3474 Lja-Chr2 81729773 81733635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3474 1 485 Cytochrome P450 AT2G45550 42.885 1.91e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3474 - - lja:Lj2g3v0039250.1 810.446