Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3453 ATGATAATCCTTGAATGTATTGCAATATTTGCAGCCATTCTCTTCTTTATATTCATCAACAATTGGAGGTTCAACAGACATGTAATCATCCCAAATTGGCCAATCACTGGCATGCTGCCAGCGATTTTGAATAATCTACGAGATATCCATGAATTTGTAACTTTGGTTTTGAAACACCATGGAGGCACTCTACGATTTGAAGGACCTTGGCTCACAAACACCAATTTCATCATTACCAGCGATCCCATGAACGTGCACTACATCACAAGCAAGAACTTCCGCAACTACGGGAAAGGCTCCGATTTCATTGACATTTTCGAAATTTTCGGAGGTGGTATTTTCAATACTGATTCTCATGAATGGAAAAAACAGAGGTCAGTGCTCCATGCATTTTTCAAAAACAGAAGCTTTGAGAACTTCCTTCAACAATTCATTGTGAAGAAGGTTGAGAGTTCCCTACTCCCATTTCTTGATCATGCATCCAAAGTAGAATCACAGGTGGAGTTACAAGATATCTTTGAGAGGTTTGCTTTTGATACAACTTGCACCATTCTATTTGGAAGTGATCCTCATTGCCTCCCTAACAAGTTCACTCATTATCAGCTATCAGATCTTGATTATCTTAAGGCTATACATATTATTGAGGATGTACAATTCTACAGGCACATCACTCCAGCATGTGTATGGAAGCTGCAAAAGTGGCTACAAATCGGTCCAGAGAAAATGTACAAGGTAGCCCAAAAAAATATTTACCAATTCTTGCATGAGTGTATCGCACATTCCAAAATTGAAAAAAGTGGAAAAAACTTGCTAGAAGAGTTAATAAAGGAAGAAGATGGAATAGGGGAATCAATGGATGAGAAATATCTTAGAGACATTGCAATGAACCTCTTGATAGCTGGAAATTCTACAATCAGTGCAGGTCTAAGTTGGTTCTTTTGGCTTGTCTCAACTCATCCAAATGTGGAAGCTAAAATTCTTCAAGAGATCAAAGACAATTTTTCAATCAAACAAGAAAATTGGATTCCTTCAAGTGTGGAGGATCTTGGTAAGCTGGTTTACCTCCATGGAGCTATATGTGAAGCCTTGAGGCTTTTTCCTCCCGTACAATTTGAACACAAGTGTGCCATCGAATCGGATATACTTCCTAGTGGAGACCGTGTCGATGCGAATATGAAAGTTATATACTCTTTGTATTCGATGGGAAGGATGGAACACATTTGGGGAGAAGATTGCTTGGATTTTAAGCCTGAGAGATGGATATCTGAGAGAGGACACATTGTCCACATGCCATCTTACAAGTTCATAACGTTTAATGCAGGGCCTAGAAGTTGTTTGGGTAAAGACATCGCCCTCATTGAAATGAAGATGGTTGCAGCTGCTATACTCCTCAAGTTTCGCATACAGGTGGTGGATGGTCATCCTGTAACACCAAGGATTTCTGTTAATCTTCGCATGAAATATGGCTTGAAGGTCAAAGTTACTAAAAGATGCATCTAA 1500 0.3927 MIILECIAIFAAILFFIFINNWRFNRHVIIPNWPITGMLPAILNNLRDIHEFVTLVLKHHGGTLRFEGPWLTNTNFIITSDPMNVHYITSKNFRNYGKGSDFIDIFEIFGGGIFNTDSHEWKKQRSVLHAFFKNRSFENFLQQFIVKKVESSLLPFLDHASKVESQVELQDIFERFAFDTTCTILFGSDPHCLPNKFTHYQLSDLDYLKAIHIIEDVQFYRHITPACVWKLQKWLQIGPEKMYKVAQKNIYQFLHECIAHSKIEKSGKNLLEELIKEEDGIGESMDEKYLRDIAMNLLIAGNSTISAGLSWFFWLVSTHPNVEAKILQEIKDNFSIKQENWIPSSVEDLGKLVYLHGAICEALRLFPPVQFEHKCAIESDILPSGDRVDANMKVIYSLYSMGRMEHIWGEDCLDFKPERWISERGHIVHMPSYKFITFNAGPRSCLGKDIALIEMKMVAAAILLKFRIQVVDGHPVTPRISVNLRMKYGLKVKVTKRCI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3453 499 SUPERFAMILY Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 494 - -
Lja2g3453 499 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja2g3453 499 PANTHER CYTOCHROME P450 13 494 - -
Lja2g3453 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3453 499 Gene3D Cytochrome P450 19 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3453 Lja-Chr2 80493191 80494690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3453 1 497 Cytochrome P450 AT2G23180 40.039 6.49e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3453 - - gmx:100791312 624.394