Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3440 ATGGACCCTCCTCTCATCAACGACTTCACATTCTCCCCCGCTTTCGCTCTCGCCGAGATTTTGCCCCGACCAGGCGGAGGAGATGAAAATTCCACCGTCACCCAACTCACCGGCAAGAACAACAACAACCACTCCACCACCTCCGAGGACGATTGCTCCAAGAATGATTCAGGCAATAAAAGGATAAGATTAGGAGGAGGAGGATCTACTGTTGAGAATGGTGGATGTGGAGGTTTGAAAGCTGCAGAAGCTAGTTCCGTGGCTGGAAGCAACAACTCTGATGAACAAAGCACTAAACCTTCAGAATCAGAGCCACCTAAGCAAGACTATATTCATGTTAGAGCACCAATAGCAATATCTTGGCTTATTGGTGACAATCTGTATATAATGCAGATCTTACTTAGTTGTTGGATAAATTAA 420 0.4571 MDPPLINDFTFSPAFALAEILPRPGGGDENSTVTQLTGKNNNNHSTTSEDDCSKNDSGNKRIRLGGGGSTVENGGCGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRAPIAISWLIGDNLYIMQILLSCWIN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3440 139 MobiDBLite consensus disorder prediction 22 109 - -
Lja2g3440 139 MobiDBLite consensus disorder prediction 85 99 - -
Lja2g3440 139 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3440 Lja-Chr2 80042593 80043853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3440 1 115 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 35.404 3.02e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3440 - - gmx:100777819 94.3597