Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3408 ATGGATTCACAACAAATACTTGACTTATTACCCCTCGTCTCTTTTTTCCTCTTCATCCTTGTGGCATTGAAAATGGGGATGAATCTGAAGAAACCAATCTCAACACAAAAACTACCTCCAGGTCCATGGAAGCTACCTATTATAGGAAATTTACCACACCTTGTTATGTCTCCACCACATAGAAAATTAAGAGACTTAGCCAAAATCTATGGACCATTGATGCATCTACAACTTGGAGAGATCTTCACAATTGTTGTTTCCTCACCAGAGTATGCCAGGGAGGTGATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCAGATTCTGTCTGCAAAGATAATTTCTTATGATTCCACAACCATAACTTTTGCACCTTATGGAAATTATTGGAGACAGCTACGGAAAATTTGCACATTGGAGCTTTTGACCCCAAAACGTGTCAATTCATTCCAACCAATAAGAGAAGAAGAGCTCAACAATCTCATCAAGAAGGTTTCTTCAGAGGAAGGATCAGATTCAGCCATCAATCTCACCAAAGCAGTGCTTTCATCGGTGTACGCGATCACTTCAAGGGCTGCATTTGGCAAGAAATGCAAAGACCAAGAAGAATTCATATCACTGGTGAAAGAAGTAGTGATTGTTGCAGCAGGTTTTTCCATAGGGGATTTGTTTCCTTCTGCGAAATGGCTTCAACATGTTTCTGGATTGAGGCCTAAGCTTGAGAGGTTGCACAGACAAATTGATCAGATATTGGAAAACATTGTCAATGAACATAAAGAAGCAAAGTCAAGAGCCAAAGAAGGACCAGATGAAGAAGAGGAAGATCTGGTGGATGTTCTCCTAAAATTTCAGCATGGTAGCAGCAACCAAGATATTTGCTTAACTAATGACAATATCAAGGCTGTAATCCTGAATATATTTGGTGCTGGTGGTGAGACAACAGCAACTACCATAGATTGGGCAATGGCAGAGATGGCAAGGGACCCAAGAGTAATGAAGAAAGCACAAGTTGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGGTGGATGAAAATTGCATTAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCTTAAGATTACACCCTCCAGCTCCACTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTCAAGGGTATCATATACCAGCAAAAAGTAAGGTCATTGTCAATGCTTGGGCCATTGGAAGAGATCCAAGATACTGGAGTGAACCAGAAAGATTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGGGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGAACCACATTTGGTTTAATCAATGTTGAGGTGGCTCTTGCATCTTTGTTGTATCACTTTGATTGGAACCTGCCCAATGGAATGAAATGTGAGGAGTTGGACATGACTGAGCAATTTGGAGCCACCATTAGAAGAAAAGATGACTTGTTCTTGATTCCCATTGCTGCTACTCCTATCACAGAGAGCTAA 1539 0.4035 MDSQQILDLLPLVSFFLFILVALKMGMNLKKPISTQKLPPGPWKLPIIGNLPHLVMSPPHRKLRDLAKIYGPLMHLQLGEIFTIVVSSPEYAREVMKTHDVIFASRPQILSAKIISYDSTTITFAPYGNYWRQLRKICTLELLTPKRVNSFQPIREEELNNLIKKVSSEEGSDSAINLTKAVLSSVYAITSRAAFGKKCKDQEEFISLVKEVVIVAAGFSIGDLFPSAKWLQHVSGLRPKLERLHRQIDQILENIVNEHKEAKSRAKEGPDEEEEDLVDVLLKFQHGSSNQDICLTNDNIKAVILNIFGAGGETTATTIDWAMAEMARDPRVMKKAQVEVREVFNMKGRVDENCINELKYLKSVVKETLRLHPPAPLLLPRECGQACEIQGYHIPAKSKVIVNAWAIGRDPRYWSEPERFYPERFIDSSIDYKGGNFEYIPFGAGRRICPGTTFGLINVEVALASLLYHFDWNLPNGMKCEELDMTEQFGATIRRKDDLFLIPIAATPITES* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3408 512 PANTHER CYTOCHROME P450 71B11-RELATED 9 506 - -
Lja2g3408 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lja2g3408 512 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 506 - -
Lja2g3408 512 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 Coils Coil 241 261 - -
Lja2g3408 512 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g3408 512 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3408 Lja-Chr2 78606206 78609100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3408 9 503 Cytochrome P450 AT3G26300 42.315 4.45e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3408 - - gmx:102665189 789.26