Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g3406 | ATGGCGACAGAAGAATCCAATGACATTGGCACACCTTGCAAATCTGTGGTGCCTCAAGATGAAACTCAAAACAGACCTTTATTACCTGATTGGACTAGGATGCAGGCATATTACAACCCTGGATCTACTCAAATTCCCCTTTTAAATCCGCATGCAACTGGCTCTTACTTGTATCACCACATGACACCAAATCAGGATGCTGCTTTGGTTTTTTCGCAAAAAGTACACCAGAATTTTGGTAAGCGCAATCTGGATTCGAAGAATAATTGTGCTGGAAACAGGGATGGAATGTCAATGAAGGAAGCGGATCAAATAAGAAAAGAAAGAAAGAGACAGTCAAATAGGGAATCGGCTAAGAGATCAAGGCTACGGAAGCAGCAAGAATGTGACGAGCTATATCAAAACATTGACACTCTTAAGGGCAAAAACAAATCACTTACAGAACAGCTTCGAAGTCTTTCTGAGGAATGTGAGGCGCTTATCAATGAAAATGATTCGATAGAGGTCCATCATCTAAGCCCAACCCCTATTTGTTAA | 537 | 0.4115 | MATEESNDIGTPCKSVVPQDETQNRPLLPDWTRMQAYYNPGSTQIPLLNPHATGSYLYHHMTPNQDAALVFSQKVHQNFGKRNLDSKNNCAGNRDGMSMKEADQIRKERKRQSNRESAKRSRLRKQQECDELYQNIDTLKGKNKSLTEQLRSLSEECEALINENDSIEVHHLSPTPIC* | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g3406 | 178 | SUPERFAMILY | Leucine zipper domain | 105 | 161 | IPR046347 | GO:0003700|GO:0006355 | |
Lja2g3406 | 178 | Gene3D | - | 105 | 168 | - | - | |
Lja2g3406 | 178 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Lja2g3406 | 178 | MobiDBLite | consensus disorder prediction | 82 | 126 | - | - | |
Lja2g3406 | 178 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 78 | 168 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Lja2g3406 | 178 | Coils | Coil | 129 | 170 | - | - | |
Lja2g3406 | 178 | PANTHER | G-BOX-BINDING FACTOR 1 | 78 | 168 | - | - | |
Lja2g3406 | 178 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 104 | 167 | IPR004827 | GO:0003700|GO:0006355 | |
Lja2g3406 | 178 | SMART | brlzneu | 101 | 166 | IPR004827 | GO:0003700|GO:0006355 | |
Lja2g3406 | 178 | Pfam | bZIP transcription factor | 104 | 164 | IPR004827 | GO:0003700|GO:0006355 | |
Lja2g3406 | 178 | MobiDBLite | consensus disorder prediction | 99 | 126 | - | - | |
Lja2g3406 | 178 | CDD | bZIP_plant_GBF1 | 107 | 157 | IPR045314 | GO:0003700|GO:0006355 | |
Lja2g3406 | 178 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 109 | 124 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g3406 | Lja-Chr2 | 78513277 | 78516048 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja2g3406 | 83 | 168 | bZIP Transcription Factor Family | AT4G36730 | 41.860 | 4.06e-18 | 78.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Lja2g3406 | bZIP_1 | 8.3e-17 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g3406 | K09060 | - | lja:Lj0g3v0280689.2 | 344.354 |