Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3406 ATGGCGACAGAAGAATCCAATGACATTGGCACACCTTGCAAATCTGTGGTGCCTCAAGATGAAACTCAAAACAGACCTTTATTACCTGATTGGACTAGGATGCAGGCATATTACAACCCTGGATCTACTCAAATTCCCCTTTTAAATCCGCATGCAACTGGCTCTTACTTGTATCACCACATGACACCAAATCAGGATGCTGCTTTGGTTTTTTCGCAAAAAGTACACCAGAATTTTGGTAAGCGCAATCTGGATTCGAAGAATAATTGTGCTGGAAACAGGGATGGAATGTCAATGAAGGAAGCGGATCAAATAAGAAAAGAAAGAAAGAGACAGTCAAATAGGGAATCGGCTAAGAGATCAAGGCTACGGAAGCAGCAAGAATGTGACGAGCTATATCAAAACATTGACACTCTTAAGGGCAAAAACAAATCACTTACAGAACAGCTTCGAAGTCTTTCTGAGGAATGTGAGGCGCTTATCAATGAAAATGATTCGATAGAGGTCCATCATCTAAGCCCAACCCCTATTTGTTAA 537 0.4115 MATEESNDIGTPCKSVVPQDETQNRPLLPDWTRMQAYYNPGSTQIPLLNPHATGSYLYHHMTPNQDAALVFSQKVHQNFGKRNLDSKNNCAGNRDGMSMKEADQIRKERKRQSNRESAKRSRLRKQQECDELYQNIDTLKGKNKSLTEQLRSLSEECEALINENDSIEVHHLSPTPIC* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3406 178 SUPERFAMILY Leucine zipper domain 105 161 IPR046347 GO:0003700|GO:0006355
Lja2g3406 178 Gene3D - 105 168 - -
Lja2g3406 178 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g3406 178 MobiDBLite consensus disorder prediction 82 126 - -
Lja2g3406 178 PANTHER G-BOX-BINDING FACTOR 3-RELATED 78 168 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lja2g3406 178 Coils Coil 129 170 - -
Lja2g3406 178 PANTHER G-BOX-BINDING FACTOR 1 78 168 - -
Lja2g3406 178 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Lja2g3406 178 SMART brlzneu 101 166 IPR004827 GO:0003700|GO:0006355
Lja2g3406 178 Pfam bZIP transcription factor 104 164 IPR004827 GO:0003700|GO:0006355
Lja2g3406 178 MobiDBLite consensus disorder prediction 99 126 - -
Lja2g3406 178 CDD bZIP_plant_GBF1 107 157 IPR045314 GO:0003700|GO:0006355
Lja2g3406 178 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3406 Lja-Chr2 78513277 78516048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3406 83 168 bZIP Transcription Factor Family AT4G36730 41.860 4.06e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g3406 bZIP_1 8.3e-17 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3406 K09060 - lja:Lj0g3v0280689.2 344.354