LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g3397	ATGGCTTCTTCTTCAGACACCAAGCAGAAGCAGCTCCCACTGAAACCAATCCCAGGCAGCTACGGCCTCCCCTTCTTCGGTCCGATCGGCGACCGCCACGACTACTTCTACCACCAAGGCCGTGACGCCTTCTTCGCCACCAGAATAAAAAAAAACAACTCCACTGTCTTCAGAACCAACATGCCTCCCGGCCCCTTCATATCCTCCGACCCTCGAGTTGTTGCGCTCCTCGACGGCGCCTCGTTCCCCATCCTGTTCGACAACGACAAGGTCGAGAAGCGCAACGTCCTCGACGGCACTTTCATGCCCACCACCTCCTTCACCGGCGGCCACCGTGTCTGCGCCTACCTAGACACCGCAGAACCTCAACACGCCGCGCTGAAACGCTTCTTCCTCGGCTTTCTCCTCTCCCGGAAGGACACCTTCGTCCCGCTCTTCCGTACCACGCTCTCGGAGACCTTCATTGAGATCGAGGACCAGCTGTCACGGAAAACCGGCACGGCCGGTTTTAATGACGTCTTTGCTACCGCATCGTTCAACTTCATGTTCCGCCTCCTGTGTGACAACAAGGATCCCTCGGAGACGAAGCTCGGCTCCGAGGGGCCCAAACTGTTTGACACATGGCTGCTCTTTCAGCTAGCGCCGCTCGCGACGCTAGGCCCTCCGAAGATCTTCAACTACCTCGAAGATATCTTGCTCCGCACGATTCCCTTCCCGTCGTGGTTTACAAGCTCCGGCTACAAAAAACTCTATGAGGCGTTCTCTACCTCAGCGGTGAAGGTGCTGGACGAGGCAGAGCAGGCTGGGTTAAAAAGAAGCGAGGCGTGCCACAATCTTGTTTTCATGGCAGGCTTCAACGCCTATGGCGGGTTGAAGAACCAGTTTCCAGTTGTGATAAAGTGGGTGGGTTTAGGAGGCAAGAAGCTTCACGAGGAACTTGCGAGCGAGATCAGGAGCGTGGTGAAGGAAGAGGGAGGCGTAACAATTCAATCCTTGGAGAAAATGAGTTTGCTGAAATCAGTGGTTTATGAGGTCCTGAGGATTGAGCCCACGGTACCGTATCAGTACGCGAAGGCGAGAGAGGACTTAGTTATTCATAGCCATGATGCTTCATTTGAGGTCAAGAAGGGTGAGATGTTATTTGGGTTCCAACCGTTCGCGACGAAGGATCCCAGGATCTTTGATGATCCTGAGGAGTTTCTGCCGCGGCGGTTTGAGGGTGAAGGTGAGAAGTTGCTGAAGCATGTGCTGTGGGGCAACGGGAAAGAGACGGAGGAGCCGTCTCCGGGGAATAAGCAGTGTGCGGGAAGGAATCTAGTGGTGCTCATGTGCAGGTTGTTCTTGGTGGAGTTCTTCTTGCGTTATGATACGTTTGAATTTGAGTTTAAAAGCAGTGCTTTTGGTCCAGCTGTTACCATTAAGTCTCTCACCAAAGCCTCCACCTTGTGA	1449	0.5397	MASSSDTKQKQLPLKPIPGSYGLPFFGPIGDRHDYFYHQGRDAFFATRIKKNNSTVFRTNMPPGPFISSDPRVVALLDGASFPILFDNDKVEKRNVLDGTFMPTTSFTGGHRVCAYLDTAEPQHAALKRFFLGFLLSRKDTFVPLFRTTLSETFIEIEDQLSRKTGTAGFNDVFATASFNFMFRLLCDNKDPSETKLGSEGPKLFDTWLLFQLAPLATLGPPKIFNYLEDILLRTIPFPSWFTSSGYKKLYEAFSTSAVKVLDEAEQAGLKRSEACHNLVFMAGFNAYGGLKNQFPVVIKWVGLGGKKLHEELASEIRSVVKEEGGVTIQSLEKMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRIFDDPEEFLPRRFEGEGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFFLRYDTFEFEFKSSAFGPAVTIKSLTKASTL*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g3397	482	PANTHER	CYTOCHROME P450 26	7	480	-	-
	Lja2g3397	482	Pfam	Cytochrome P450	309	456	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g3397	482	SUPERFAMILY	Cytochrome P450	13	459	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g3397	482	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	7	480	-	-
	Lja2g3397	482	PRINTS	E-class P450 group IV signature	335	351	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g3397	482	PRINTS	E-class P450 group IV signature	388	406	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g3397	482	PRINTS	E-class P450 group IV signature	434	452	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lja2g3397	482	Gene3D	Cytochrome P450	8	481	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g3397	Lja-Chr2	77960148	77962757	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja2g3397	1	480	Cytochrome P450	AT5G42650	51.037	9.84e-171	489

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g3397	K01723		-	gmx:100801764	761.911

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g3397	2	77960148	77962757	Lja2g3397	2	77960148	77962757	ECH