Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3383 ATGGCTCACCATTGTTCCAACAAGGCCTTAGGTTGCTTTCTCTTGTTCTCTCTTCTTCTCTCAACTTTTTCTCATGCTCATTTTGTTGAAATTGACCGAAGAGTAACACTCCCAATTAGAAATGGTGCTAATGATGATCTTTCGGAAGAAATTGGAGATGCTCCTTCCATAGAGTTTGGAGATTCTCCTTCCGTAGAATTTGGAGGTGCTCCTAGTGCTTCCATAGAATTTGGAGATTCTCCTTCCGTAGAATTTGGAGGTATTCCTAGTTTTTCTATAGAATTTGGAGATTCACCTTCCATAGAATTTGGAGTGGCTCCTTCAAATGCTCCTTCAAACAAATTCGGAGGTTCTTCTTCCATTGAATTTGGAGATGCTCCTTCAAATGCTCCATCAAAAGAATTTGGAGGTTCTTCCATAGAATTTGGAGAGGCTCCTTCAAATGCTCCATCAAAAGAATTTGGAGGTTCTTCTTCCATAGAATTTGGAGAGGCTCCTTCAAATACTCCTTCCAAAGAATTTGGAGGTTCCTCTTCCATAGAATTTGGTGAAGCTCCACTCCCAAAAGTTGATGGTGAAGCTCCACACCCTGCAATTGGATTTGGTGATGCCCCTCCACCAGAAAATGAAGTTAAAAATTGTAGCAAACAAAATTTGGCCCATGAAAGGTTAAAAACTGCTTATGTTGCCCTTCAAGCATTTAAAGAGGCTATTTACTCCGACCCTTTGAATATGACATGTAATTGGGTTGGTGATGATGTTTGCTCCTACAATGGGGTGTTTTGTGCTCCTGCTCTTGATGATCCCACATTGAATGTAGTTGCTGGTGTTGATCTCAACCATGGGGACATTGCAGGCCATCTCCCAGAAGAGTTGGGCCTCTTGAAAGATCTTTCACTTTTCCACATTAACTCCAACAGATTTTGTGGTATTGTCCCAGATAGCTTTGAGAATCTCACTCTTTTGTATGAGTTTGATATCAGCAACAACCGCTTTGTGGGTGGTTTTCCCTCTGTGGTCCTCAAGGTGCCAAACTTGAAGTACTTGGACATCAGATTCAATGACTTTGAAGGAGTTTTACCTCCAGAGCTATTTGAGAAGGATCTTGATGCAATATTCTTGAATGACAACCGTTTCACGTCTACTATCCCAGAAACACTAGGAAAATCCAATGCCTCTGTAGTGAATTTTGCTAACAACAACTTCACAGGTTGCATTCCAAAATCAATAGGGAACATGGTGAACTTGAATGAGATTATCTTCTTGGGCAATGGCCTTGGAGGTTGCTTCCCTCAGGAGATTGGATTGTTGGAAAACATGAATGTGTTTGATGCTAGTGACAATGAGTTTATAGGGACTCTGCCTAACTTTTCAGGGTTGAAAAATGTGGAGGTCATAGACATTGCTCACAACAAGCTCACTGGATATGTGTCTAACTCCATTTGCCAACTACCTTTGTTGCAGAACTTCACATTCTCTGATAATTACTTCAATGGGGAGGCACAAGCTTGTGTGCCTTCCGCAAATTCAGGTGTTGTTTTGGATGACTCCAACAACTGTTTGTCAGGAAGGAAGAATCAAAAGACATCGAAGCAGTGCTTGCCAGTGCTAACTCGCCCTGTGGACTGTAGCAAAAACTGTGGTGGAGGCAGTGGTGATAGTAGCAACCCTGCTCCATCAATACCAAAACCAACTCCATTATCACCTTCGCCTACGACAAAACCACCAAAGTCCCAACCTCCAAAGATTGAGACACCAAAGGCTGAACCACCACCTACACCAAAGGCTCAGTCACCTTCAACCCCAAAATATCAGACACCACCAACACCAAAGGTAGAAAAACCCCCAACACCAAAGGTCCAACCACCTCCAACCCCAAAATATCAGCCACCTCCAACTCCAATGGTTGAGACTCCACCAACACAAAAGGCTCAGCCACCTCCTACACCAAAGGCTCAGCCACCTCCAACACCAAAATCTGAACCACCGCCAACACCAAAGGCAGAACCACCACCAACACTACCACCTGTTGAGGATATCCCACCATCAAGGGCACCGGTGTCACCACCTCCTGTGCTTGTTCATTCACCACCACCTCTAGTCCACTCCCCTCCACCACCACCAATTCATTCTCCTCCGCCCCCTGTCCACTCGCCACCCCCACCAGTTCACTCTCCACCACCACCAGTTCACTCTCCTCCTCCCCCAATCCATTCTCCACCACCACCAATTCATTCTCCTCCACCTCCCAAAGTTCACTCTCCCCCTCCTCCAGTTTACTCACCACCTCCCCCAGTCCACTCACCACCACCACCACCTGTTCATTCACCTCCTCCCCCAGTTCACTCCCCACCACCACCAGTGTACTCTCCTCCTCCCCCTGTCCGTTCCCCACCACCACCAACATGGGATGACGTTGTCCTCCCACCAACCTTCGGATCTCAATACAGCTCGCCTCCTCCACCAACAATTGCTGGATACTAA 2484 0.4593 MAHHCSNKALGCFLLFSLLLSTFSHAHFVEIDRRVTLPIRNGANDDLSEEIGDAPSIEFGDSPSVEFGGAPSASIEFGDSPSVEFGGIPSFSIEFGDSPSIEFGVAPSNAPSNKFGGSSSIEFGDAPSNAPSKEFGGSSIEFGEAPSNAPSKEFGGSSSIEFGEAPSNTPSKEFGGSSSIEFGEAPLPKVDGEAPHPAIGFGDAPPPENEVKNCSKQNLAHERLKTAYVALQAFKEAIYSDPLNMTCNWVGDDVCSYNGVFCAPALDDPTLNVVAGVDLNHGDIAGHLPEELGLLKDLSLFHINSNRFCGIVPDSFENLTLLYEFDISNNRFVGGFPSVVLKVPNLKYLDIRFNDFEGVLPPELFEKDLDAIFLNDNRFTSTIPETLGKSNASVVNFANNNFTGCIPKSIGNMVNLNEIIFLGNGLGGCFPQEIGLLENMNVFDASDNEFIGTLPNFSGLKNVEVIDIAHNKLTGYVSNSICQLPLLQNFTFSDNYFNGEAQACVPSANSGVVLDDSNNCLSGRKNQKTSKQCLPVLTRPVDCSKNCGGGSGDSSNPAPSIPKPTPLSPSPTTKPPKSQPPKIETPKAEPPPTPKAQSPSTPKYQTPPTPKVEKPPTPKVQPPPTPKYQPPPTPMVETPPTQKAQPPPTPKAQPPPTPKSEPPPTPKAEPPPTLPPVEDIPPSRAPVSPPPVLVHSPPPLVHSPPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPIHSPPPPKVHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVYSPPPPVRSPPPPTWDDVVLPPTFGSQYSSPPPPTIAGY* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3383 827 MobiDBLite consensus disorder prediction 151 176 - -
Lja2g3383 827 MobiDBLite consensus disorder prediction 548 827 - -
Lja2g3383 827 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 214 748 - -
Lja2g3383 827 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 721 822 - -
Lja2g3383 827 MobiDBLite consensus disorder prediction 116 185 - -
Lja2g3383 827 MobiDBLite consensus disorder prediction 559 806 - -
Lja2g3383 827 SUPERFAMILY L domain-like 228 523 - -
Lja2g3383 827 PRINTS Proline rich extensin signature 619 644 - -
Lja2g3383 827 PRINTS Proline rich extensin signature 598 615 - -
Lja2g3383 827 PRINTS Proline rich extensin signature 579 595 - -
Lja2g3383 827 PRINTS Proline rich extensin signature 555 576 - -
Lja2g3383 827 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 214 748 - -
Lja2g3383 827 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 721 822 - -
Lja2g3383 827 Gene3D Ribonuclease Inhibitor 226 528 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3383 Lja-Chr2 77409369 77411852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3383 216 647 Trihelix Transcription Factor Family AT4G33970 58.447 3.40e-160 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3383 - - gsj:114419228 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3383 2 77409369 77411852 Lja2g3383 2 77409369 77411852 ECH