Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3370 ATGCAATCCATGTCTTCCTCCAATGCTTCATCTTCCAACCTCAGAAACCCAAAATGGATAAACCGAGTTTTCATAAGCTTCGATGCGAAAGACGTTGAAGAGGAACCTTTCATTTTCACTCTCTACGCACACTTGAAGAAAGCCGGAATCCGAACATGCTTCGACCCAGTAGACACGGTTCGCAGACGACAGGAAACACTGCCCTCACGGCTGCAAGCAATCGAAAGGTCTCGGCTTTCTGTCGTTATTTTCTCCAAAGGCTACGCTGGTTCTACCGAGTGTCTGGTGGAGCTGGAGAATATAATGGACTGTCACAGAGTCAAGGGCCACATAGTTTTTCCAGTGTTCTATGGCGTGAACTTGTGGAATGTGCGCAAACAAAAGGGTGAGTTTGGAGCTTTGTTTGAAGGAATGGTCAAGAACGTGCACAAAGACAGAGTGTTGAATTGGAGGAGAGCCCTTTCTGAAGCTGCTTTCTTTCCCGGTTGCCGTGCGACCCCTCGCCGTTATCGTCATACTATTGTGGATTTTCAGGCTTCTGATGAAATTGTGCACATTGTTTGTATGATGCTAGATGGTAAATATTTGTCCTGCACATACCATCAAATTGGGATAAGTATTCATACTAAAAATATCTATGACAGCTTGAGTAATGATCTTGAAAGTGTTCACTTAGTAGGAATATGGGGAAAGGGAGGAAGTGGTAAAACAACCATTGCCAAAGTCATTTACAATAACATGTGTCACAGTTTTGAGGGTTCGATTTTCCTTGCAAATATTAAGGATGAATGGAAGCAGGATAATGGCAAAGAATATCTACAAAAACAACTTCTTACAGAGATCAATAGTTCAACAGACTTGATAATGAATAGCACGGAAATGGAGAAAATATTGCCTCACAAACGGGTACTTGTAGTACTTGATGATGTGAGCCAAAGAGACCAATTGATTTCATTATGTGGAAGTCCAGTATGGTTTGGTCCTGGGAGTATGATATTGATTACAGCTAGAGAAAAGCATTTACTTGATGACCTTGAATTGGACTTTGAATATGAAATGAAAGGAATGGAATCAAGTGAATCACTTCAGCTTTTTGGTTCGCATGCATTTAAGAATGATAGTCCTGCTGGTAATTTGATTAAACTGTCAAAAAAGGCAATTTCTCACTGTGGAGGACTGCCGTTGGCTCTTGAAGTTCTGGGCTCGTTGTTACTTGACAGAAAAAGATCTGAGTGGAAAAGTATATTGAAGCTACTTAAAAGAAATCAAAGCAATGAGGTGCTAAATATACTAAAAGTGAGCTATGATTTTCTAGATCATAATGAGAAAAAGATATTCATTGAAATAGCCTGTTTCTATATTGGAATGGACAGACACAACATTACACAATTATTAAATGGCTGTGGACTTGCTGCGGAAACTGGGATAAGTAAGCTCATTGAACTGAGCCTTTTGAAGGTTGACATGAATAACAAGCTTGAAATGCATGATTTATTTCAAGACATGGGAAGCGATTTGAATGATTTAAAGCCAAAATCCAAATGGATCCATAATGTGTTCCTGAGTTTCCGAGGTGTAGACACTCGCAGGTCGTTTACTTCTCATCTCTATGCAACTTTACAAAATGCTGGCATGGCAGTTTACATGGATGACAACCTTGAAAGGGGAGAAAATATCTCATCGTCACTGTTGCAAGCTATTGAAGTTTCGCGAGTTTCTATCATCATTTTCTCAATAAACTATGCTAATTCAAGATGGTGCCTTCAAGAGCTGGAGAAAATCATGGAGTGTCACAGAACTCTTGGTCAAGAAGTTCTACCCGTATTCTATGGTGTGGAACCGTCAGAGGTGCGTAACCAAATAGGATCTTTTGGAAAAGCATTAGGAGGACTTGTGCAGAGAATCTCAGATACAAAAGATATGATTATCAGTTGGAAAAGGGCTCTCACTGAAGCTGCAAACTTGTCTGGGTGGAATTTAAATGATTACAGAACTGAGGTCGAGTTGATTGGTGATATTCTTAAAACTGTTGCTGCAAAACTAGACGACAGCACATGCTTATTTGTTGCTGATCACCCGGTGGGAGTGGAATCTCGTGTGCAGGACATCATTCAATTGTTAAATGGTAAATCAAATGAGATTCAAATCGTGGGAATCTTGGGAATGGGAGGATGTGGTAAAACAACCATTGCCAAAGCCATTTACAATGAAATTAGTAAAAAGTTTGAATGTAGAAGTTTCCTTGCAAATATAAGGGAGACTTGGGACCAAGATGATGGCAAAGTTTATTTGCAAGAACAACTTCTTTCCGGCATCTTGAAAACTAGAAGGATGAAATTATATAACATTGATTTGGGAAGAACTATAATAAAGGAAAGCCTTTGCCAGAAAAGGTCACTTGTTGTACTTGATGACGTAAATAATTTGGAGCAACTAAATGCTTTGTGTGGAAGTCGTGACTGGTTTGGTCCAGGCAGTAAGTTAATCATCACAACAAGAGATGAACATTTACTGAATGTCCTTCGGGTGGACAATGTATACAGAATGAAAGAAATGGATGCTAGCGAATCTATTGAGCTTTTTAATTGGCATGCATTTAAGCAAGCTTCTTCAAAAGAAGATTTCATTGGACTCTCAAGAAGGGTTGTTGCATACTCTGGAAAACTACCACTAGCCCTTGAAGTTCTTGGCTCTTATTTATTTGAAAGGAAAATTGCTGAGTGGGAAAGTACATTATCGAAACTTGAAGTAATTCCCAATGATCAAATACAGAAGAAATTAGAATTGAGCTATTATGGTTTAAGTGATGATATGGAGAAAGACATATTCCTTGATATATGTTGTTTCTTTATAGGAAAGGACAGAAACTATGTTACACAGATTTTAGATGGATGTGGACTTCATGCTGAAATTGGGATTACTGTCCTCATAGAGAGAAGCCTTGTAAAAGTTGACAAGAATAATAAGCTTGAAATGCATGATTTGCTCAAAGTAATGGGAAGAGAGATTATTCGTGAGATGTCACCTAATAAGCCCGAGGAGCGCAGCAGGTTATGGTTTCATGATGATATAGTTGATGTCATGACAAACAACACTGCAACAAAAGTTGTCAAGGGTTTGGCTTTTAGCTTACCTATAACCAATGATGTTGTTTTCGAGACTAAAGCGTTTAAGAAGATGAAGAGACTGAGATTGCTTCAACTTGGTCATGTAAAACTTACTGGAGATTTTGAATATTTATCAAAAGACTTGTGCTGGCTCTGTTGGCATGGATTTCCTTTAAGATACATGCCTGGGAACTTTTGTCTGAAAAAATTAGTTGCTATTGACTTAAAGCACAGCAATCTGCAATTAGTCTGGAAGGAGCCGCAGTTGCTTGATAGGCTGAAATTTCTCAATCTGAGTCATTCCCATTACTTGACAAAAACCCCTGACTTTTCAAGATTACCAAATCTTGAAAAGCTAATCCTTGAAGATTGTTCACGATTGTCTATTGTTCACTCAACAATTGGTGATCTCAAATATCTTATTATGGTAAATTTGAAAGACTGCAAATCCCTCAGTCACCTCCCAAGAAGTATCTACAAGTTGAAATCTCTGAAATCTCTTGTTCTTTCTGGCTGTTCAAAAATTGACAAGTTGGAAGAGGACATCATGCAAATGGAGTCCTTGACAAGTCTAGTGGCAGATGACACTGCTATCACTCAAGTGCCCTTTTCTCTAATGAGATTAAAAAATATCAAATATGTATCTGTGTGCGGCTATGAAGGATTATCAAGTCATGTATTTCCTTCTCTAATTTGGTCTTTAATATCTCCACGCAATCTCATGTATAAAGCTTTTGGGAGCATTTCATCATCACTTCAAAGTTTTTCACTTGGTTTATCTACCATGAATCCTGATGAATTGGTATTTAGACCAAGAACTCCTCAGATAACATATAGTGAGACTCACACATCAATTGATCTTCACAACTCTATTTACACTGAAAGGTCTGAAAATTTCACCAGCTCCCTTGTTATTCAAGCTGGAGAGTGCAACAAAGCCACCGATACTTTTCCAGAGAGTATTTCACAGGGATGGAGTGATGATGCATCGGGTGACTGTTCTTTTCCTAGTGACACTAAATGGCTAACCTTCAAAGGCGAAGGTTCCTCATTATTTTTTAAAGTGCCTAACACTGGTAGCAAGTTGAAAGGAATGACTCTGCGCATAATTTATTCCTCTTACTTTGTCAATCTGGCTTCTGAATGGGATCTTCTTAGTGTCTTGATAATAAATCACACAAAGAACATCGTTCATCCCTACAAGCAAGACACAAGAACTTCCCTCAATGATGAAGAGTGGCAAGGATTGTTGTCAAATCTCGAACCTGGTGATGAAGTGGAGGTTGTTATAGTTTTGGAACATCAATTTACTGTGAAGAAGATAATAGCACATCTAATATATGATGAATTAGCTTATGACAAAATTGTGGAGTGTTCATCAGCACCCGACAGGGGTCAAATTTGA 4512 0.3856 MQSMSSSNASSSNLRNPKWINRVFISFDAKDVEEEPFIFTLYAHLKKAGIRTCFDPVDTVRRRQETLPSRLQAIERSRLSVVIFSKGYAGSTECLVELENIMDCHRVKGHIVFPVFYGVNLWNVRKQKGEFGALFEGMVKNVHKDRVLNWRRALSEAAFFPGCRATPRRYRHTIVDFQASDEIVHIVCMMLDGKYLSCTYHQIGISIHTKNIYDSLSNDLESVHLVGIWGKGGSGKTTIAKVIYNNMCHSFEGSIFLANIKDEWKQDNGKEYLQKQLLTEINSSTDLIMNSTEMEKILPHKRVLVVLDDVSQRDQLISLCGSPVWFGPGSMILITAREKHLLDDLELDFEYEMKGMESSESLQLFGSHAFKNDSPAGNLIKLSKKAISHCGGLPLALEVLGSLLLDRKRSEWKSILKLLKRNQSNEVLNILKVSYDFLDHNEKKIFIEIACFYIGMDRHNITQLLNGCGLAAETGISKLIELSLLKVDMNNKLEMHDLFQDMGSDLNDLKPKSKWIHNVFLSFRGVDTRRSFTSHLYATLQNAGMAVYMDDNLERGENISSSLLQAIEVSRVSIIIFSINYANSRWCLQELEKIMECHRTLGQEVLPVFYGVEPSEVRNQIGSFGKALGGLVQRISDTKDMIISWKRALTEAANLSGWNLNDYRTEVELIGDILKTVAAKLDDSTCLFVADHPVGVESRVQDIIQLLNGKSNEIQIVGILGMGGCGKTTIAKAIYNEISKKFECRSFLANIRETWDQDDGKVYLQEQLLSGILKTRRMKLYNIDLGRTIIKESLCQKRSLVVLDDVNNLEQLNALCGSRDWFGPGSKLIITTRDEHLLNVLRVDNVYRMKEMDASESIELFNWHAFKQASSKEDFIGLSRRVVAYSGKLPLALEVLGSYLFERKIAEWESTLSKLEVIPNDQIQKKLELSYYGLSDDMEKDIFLDICCFFIGKDRNYVTQILDGCGLHAEIGITVLIERSLVKVDKNNKLEMHDLLKVMGREIIREMSPNKPEERSRLWFHDDIVDVMTNNTATKVVKGLAFSLPITNDVVFETKAFKKMKRLRLLQLGHVKLTGDFEYLSKDLCWLCWHGFPLRYMPGNFCLKKLVAIDLKHSNLQLVWKEPQLLDRLKFLNLSHSHYLTKTPDFSRLPNLEKLILEDCSRLSIVHSTIGDLKYLIMVNLKDCKSLSHLPRSIYKLKSLKSLVLSGCSKIDKLEEDIMQMESLTSLVADDTAITQVPFSLMRLKNIKYVSVCGYEGLSSHVFPSLIWSLISPRNLMYKAFGSISSSLQSFSLGLSTMNPDELVFRPRTPQITYSETHTSIDLHNSIYTERSENFTSSLVIQAGECNKATDTFPESISQGWSDDASGDCSFPSDTKWLTFKGEGSSLFFKVPNTGSKLKGMTLRIIYSSYFVNLASEWDLLSVLIINHTKNIVHPYKQDTRTSLNDEEWQGLLSNLEPGDEVEVVIVLEHQFTVKKIIAHLIYDELAYDKIVECSSAPDRGQI* 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3370 1503 SUPERFAMILY "Winged helix" DNA-binding domain 922 1028 IPR036390 -
Lja2g3370 1503 ProSiteProfiles TIR domain profile. 515 681 IPR000157 GO:0007165
Lja2g3370 1503 Pfam NB-ARC domain 697 918 IPR002182 GO:0043531
Lja2g3370 1503 Pfam NB-ARC domain 210 435 IPR002182 GO:0043531
Lja2g3370 1503 Gene3D - 514 684 IPR035897 -
Lja2g3370 1503 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 526 1482 IPR044974 GO:0006952
Lja2g3370 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 447 IPR027417 -
Lja2g3370 1503 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 33 505 - -
Lja2g3370 1503 SUPERFAMILY L domain-like 1048 1291 - -
Lja2g3370 1503 ProSiteProfiles TIR domain profile. 19 191 IPR000157 GO:0007165
Lja2g3370 1503 PRINTS Disease resistance protein signature 1195 1211 - -
Lja2g3370 1503 PRINTS Disease resistance protein signature 716 731 - -
Lja2g3370 1503 PRINTS Disease resistance protein signature 886 900 - -
Lja2g3370 1503 PRINTS Disease resistance protein signature 793 807 - -
Lja2g3370 1503 Gene3D - 852 935 IPR042197 -
Lja2g3370 1503 Gene3D - 356 439 IPR042197 -
Lja2g3370 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 684 946 IPR027417 -
Lja2g3370 1503 SUPERFAMILY "Winged helix" DNA-binding domain 426 507 IPR036390 -
Lja2g3370 1503 Gene3D - 198 349 IPR027417 -
Lja2g3370 1503 Gene3D - 685 846 IPR027417 -
Lja2g3370 1503 SUPERFAMILY Toll/Interleukin receptor TIR domain 513 658 IPR035897 -
Lja2g3370 1503 Gene3D Ribonuclease Inhibitor 1046 1306 IPR032675 -
Lja2g3370 1503 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 505 IPR044974 GO:0006952
Lja2g3370 1503 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 526 1482 - -
Lja2g3370 1503 Gene3D - 16 197 IPR035897 -
Lja2g3370 1503 SMART AAA_5 222 357 IPR003593 -
Lja2g3370 1503 SMART AAA_5 713 853 IPR003593 -
Lja2g3370 1503 SMART till_3 20 160 IPR000157 GO:0007165
Lja2g3370 1503 SMART till_3 516 655 IPR000157 GO:0007165
Lja2g3370 1503 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 158 IPR035897 -
Lja2g3370 1503 Pfam TIR domain 23 156 IPR000157 GO:0007165
Lja2g3370 1503 Pfam TIR domain 517 682 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3370 Lja-Chr2 76908626 76938778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3370 23 506 WRKY Transcription Factor Family AT4G12020 26.069 5.18e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3370 - - lja:Lj3g3v1048920.2 2170.59