Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3352 ATGTCTCGTGGCTTCCAAATTAGGGCGACTCCAGTTACCATACTTGGCCATTTGTTGTTCATAGCAATAGCAACCCTTGTGTTAGTATGGTTACTGCGCTTCCGTGAAGGTGTTGCTTTCAATTCTTCAGAAAAAGCCAAGATATTAAATCTGCATCCACTTCTAATGGTAATTGGGTTTATTTTAGTTGGTGGAGAAGCAATCATGGCATACAAGTCCATCCCTGGAACACGAAGAACAGCAAAGGTGGTTCACCTTCTACTACATGTGATAGCTCTAGCATCTGGTGTTTTAGGAATTATTACAGTTTTCAAATTTAAGAAAGAAACAGGTCTTCCTAATATGTATACATTGCACTCTTGGCTTGGCATGTCAGCAATATGCTCATTTGGCCTACAGTATATCTTTGCCTTCTTCGCCTATTTCTTCCCAGGAGCAGAAGTATCTACTAGAGCCACGCTTTTACCATGGCACAGGTTCATAGGAATTGCCATCTTTCTTCTTGCAGTTGGCACAGCTGAGACGGGTTTGCTCGAATATTTTCAGTTTCTAGGCCTTTTCCGCAGCCAAGAGGCTCTAATAGTGAACTTCACTGGCCTCTTACTCTTTCTGTTTGCTGCCTCTGTTAGCCTCTCAGTAATTCTCCCAAGAAAATACTACTAG 663 0.4208 MSRGFQIRATPVTILGHLLFIAIATLVLVWLLRFREGVAFNSSEKAKILNLHPLLMVIGFILVGGEAIMAYKSIPGTRRTAKVVHLLLHVIALASGVLGIITVFKFKKETGLPNMYTLHSWLGMSAICSFGLQYIFAFFAYFFPGAEVSTRATLLPWHRFIGIAIFLLAVGTAETGLLEYFQFLGLFRSQEALIVNFTGLLLFLFAASVSLSVILPRKYY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3352 220 Gene3D - 5 219 - -
Lja2g3352 220 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Lja2g3352 220 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 216 - -
Lja2g3352 220 PANTHER CYTOCHROME B561-RELATED 6 216 IPR043205 GO:0016491
Lja2g3352 220 SMART 561_7 51 177 IPR006593 -
Lja2g3352 220 Pfam Eukaryotic cytochrome b561 51 180 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3352 Lja-Chr2 76060693 76068758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3352 6 212 Chloroplast and Mitochondria Gene Families AT4G25570 44.550 1.95e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3352 K08360 - gmx:100785824 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3352 2 76060693 76068758 Lja2g3352 2 76060693 76068758 ECH