Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g3324 | ATGATGGGGCCGCCGAATGGATTATCAAATGAAAGGAAACAAGATTGGCTTGGTGTTCTTATTAATAACAGCTTTGGCAATTGTGAAGATCATGAAGATGTTAAGTTTAATGAAAAGAATGTGTTCTGTGTGGACTGTGAAATTAGCTTATGCAGGCACTGTAAGGAAGCCCATTCCCTCCATCGAAGGTTCCAGATATACCGATATTGCTATCAAGATGTTGTTCGCCATTCTGATCTGCTCAAGTATTTTGACTGCTCCAACATTCAGACTTATATATCCAACAATGACAAGATTGTGCACCTCAAACCAAGGCCTTCAATCAAAGACATCAAACTAGGAAAAATATCAAAATCTGCTAATCAAGCCAAAGAAGCACAAACATCCACACCTCCTAAGTCTGGTGGTATTTGTAAAGAATGTGGAAAACATTTACAAGATGCGCGCAATCATTTCTGCTCCATTAAATGCAAGATCTCAGTGCTTCCAGTGGAACCCCAAAAGCAAGGAATTGCAGAACATTCTATGAATAAAAAGCAGTGTTCACAGAAGATTTCAGAGGAGCCTTTGAACCAAAATGATAACCAAAATTCAGAGAATGAGTCATCTATCTCTATAGCTGAGCCATATGAATGTGTTGAAATAGTGAACTTCAGAAAGAGGCCAAGGAAAAGCACCCCTCACATATCTCCTTTGATATGA | 702 | 0.3889 | MMGPPNGLSNERKQDWLGVLINNSFGNCEDHEDVKFNEKNVFCVDCEISLCRHCKEAHSLHRRFQIYRYCYQDVVRHSDLLKYFDCSNIQTYISNNDKIVHLKPRPSIKDIKLGKISKSANQAKEAQTSTPPKSGGICKECGKHLQDARNHFCSIKCKISVLPVEPQKQGIAEHSMNKKQCSQKISEEPLNQNDNQNSENESSISIAEPYECVEIVNFRKRPRKSTPHISPLI* | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g3324 | 233 | MobiDBLite | consensus disorder prediction | 172 | 205 | - | - | |
Lja2g3324 | 233 | Pfam | PLATZ transcription factor | 68 | 159 | IPR006734 | - | |
Lja2g3324 | 233 | ProSiteProfiles | Zinc finger B-box type profile. | 28 | 66 | IPR000315 | GO:0008270 | |
Lja2g3324 | 233 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 10 | 230 | - | - | |
Lja2g3324 | 233 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 10 | 230 | - | - | |
Lja2g3324 | 233 | MobiDBLite | consensus disorder prediction | 173 | 205 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g3324 | Lja-Chr2 | 75373385 | 75375477 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Lja2g3324 | PLATZ | 5.2e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g3324 | - | - | gmx:100820425 | 286.574 |