Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3296 ATGAATGCAAAGGGGCATAAATTTGTGAGGTTTGGGGACTGGAAATCAGAGTCATCTTTTAGTATAGAGCAGGAAGGTTCTGTAAACAATGGATATCACAAGAGAAAAGGCATACCGAGTGTAAGTGCTATTTTGAAGAGTATTGGAAGAAGACTCGAGAGTGGAACAGAGAAAGTGAAAAGCTTGAGAAGACATTCTGCTGCTGTCCATCCTTTAAGTGATGGAAAGACAAAAAAGCCGACTTCTGGGTGCAATATTCTTGATCCTCAAGGGTCAATGCTTCAGAAATGGAATAAAATATTTGTAATCACATGTGTGATGGCAGTTTCTGTGGATCCGCTGTTCTTTTACATTCCAGTGATTGTTGGTAAAAACAAGAGTGGTATGAAGACATTCTTCTATCTCTGTGGAACATTTTCAAAGATTGCTACTATTGCAAAAAACAGACCCATATGTAAGTTAGTTATAATGTATTCTGTTAGCATTAAAGTGACGAGTCTATATATAGTGTTTCTTGCAAACAAAGGCAGAATTTATGTAAATCAAGTTGATATTGATATTAACATCATACTATCCCTTAGATTTGGTAGCCAATACTTATTCAATTGA 609 0.3596 MNAKGHKFVRFGDWKSESSFSIEQEGSVNNGYHKRKGIPSVSAILKSIGRRLESGTEKVKSLRRHSAAVHPLSDGKTKKPTSGCNILDPQGSMLQKWNKIFVITCVMAVSVDPLFFYIPVIVGKNKSGMKTFFYLCGTFSKIATIAKNRPICKLVIMYSVSIKVTSLYIVFLANKGRIYVNQVDIDINIILSLRFGSQYLFN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3296 202 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 127 - -
Lja2g3296 202 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3296 Lja-Chr2 74101728 74105940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3296 1 126 Ion Channels AT5G53130 41.085 5.00e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3296 K05391 - gmx:100816236 177.563