Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g3277 | ATGGCAGATTATTCCCAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGTTGACACCCGCTTAGCGTTCACCGATCACTTATATGCAGCTTTGGTACGCAAAAGCATAATAACTTTCAGAGATGATGAAGAATTACCCAGGGGTGAAGTCATCTCAGAAAAACTTGGGCACGCAATTGAGCAGTCTCTTTCAGCAATTGTCATAATCTCCAAAAACTATGCTTCTTCAGCTTGGTGTTTGGATGAGTTACTCAAGATTCTTCAGTCCAAACATTTGTTGGGACAACAAGTATTTCCAATCTTCTATGGTGTGCATCCCTCTGATGTACGGAACCAGAGAGGAAGTATTGCAGAAGCTTTTTGGAAACATGAAGAAAAATATAATGAAAACAAAGAGAAGGTGCAAAACTGGAGAGATGCATTAAGAGAAGTTGCCAACTTGTCAGGGTGGGAATCTAAGGATCAACATGAAACAGAACTCATTGAAGAAGTTGTTTCACAGGTGTGGAAAAAACTAGAACTCAAATTCCCAGCATATAATGATGGACTGGTTGCAATTGACACAAGATTACAAGATTTATTTTCAACGCTGAAGCTAGGATTGGAGGATGTGCGTTTCATAGGGATATGGGGCATGGGTGGTATAGGTAAAACAACTCTTGCCACAGCTCTCTTCAAGAAAATTAGAAGCCATTTTGATGTTAGTTGCTTTATTGCCAATGTTAGAGAGGCCTCTGGGGAAAGAAACCAAGGTCTGCTACAGTTACAAAATAAAATTCTTTCTAAACTAGACATAAAAGGAATGGTAATCGATACTTTAAGCGAAGGAAAGGACAGCTTGAGAAACCTCTTATCCAACAAAAAAGTTCTACTTGTTCTTGATGATGTAAGTTCTAAAATCCACCTTGAGAATTTGGCTGGAAACCAAGAATGGTTTGGTCAAGGGAGTAGAATTATCGTCACAACTAGGGATAAGCACCTGCTAATATCACATGTAGTGTTGTTTGAAATGTATGAGAGTAAAATCTTAAATAGAAGTGAATCCCTTCAACTTTTTTGTGAGAAGGCATTTAAAGAAAACAAACCTAAAGAGGATTATTTGAAGTTGTCTCAAAGTGTAGTTGAATATGCTGGAGGCCTTCCCTTGGCTCTTGAAGTGTTGGGTTCTTTTCTTTGTGGAAGAAGTTTATGTGATTGGAAAGATGCATTGATCAAGATTAAGAAAGTTCCACATGATGATATCCTGGACAAACTAAGAATAAGTTATGACATGTTAGAAGATGAGCACAAGACCATATTCCTTGATATTGCCTGTTTTTTTAAGGGATGGTACAAACATAAAGTGATACAAATATTGGAAAGTTGTGGCCTTCATCCAACAGTTGGAATAAATGTTCTTATTGAAAAATCACTATTAACTTTCGATGGAAGAGTTATTGGAATGCATGACATGCTTGAAGAAATGGGTAAAACCATAGTTTTTCAAGAATCTCCTAATGATCCTGGTAGGCGGACTAGATTATGGTCACTAGATGATATTGATCAAGTGCTGAGAAAAAATAAGGGAACTGAAATTGTCCAAGGTATAGTTTTGAACTCATCACCATCTAAGCCATACAAAGCACATTGGGACCCTGAGGCCTTCTCAAGGATGTGCAATATGAGATTTCTCATTGTATTATGTGACATGCATCTTCCTCTTGGTCTGAAATGTCTTCCTAGCTCACTGAAAGTTCTTGTATGGTGGGCATATCCGTTGAATGCTCTACCACTTGAAGTTCAGCTAGATGAGCTTGTGCACATGCAAATGATCAATAGTAAAATTAGACAACTATGGAATGGAACTCAGTGTTTTGGAAAGCTGAAAGTAATTGATTTGAGTAATTCCAAGTATCTACGTCAAACTCCGAATATCTCAGGAGTTCCGTGTCTTGAAGAGTTGTATCTTAATGATTGTACAACACTTGTTGAAGTTCACCAATCTATTGGACAACACAAAAAGCTCATGATATTGCATATGATGGGATGTATAAATCTCAAAACCTTTCCAAACAAATTGGAAATGTGTTCACTGAAAACTTTCTATCTTTCTAATTGCCTAACAGTTCAAAGACTTCCTGATTTTGGGGAAAACATGACATCAGTTTCAGTGCTTAATTTAATGAATTGCAAAAATCTTTTAGGCCTTCCGAACAGCATTAGTAACCTGAAGTCTCTCAGAGTTCTCAATATATCTGGATGCTCAAAGGTTTTACACCTGCCAGATAATTTAAATCAGAACAAGGCTCTGGAGGATCTTGACTTGAGTAGAACTGCTATTACAAAATTAGATCCATTCCTACTTCAGTTAGGGAATCTCAAAAGGTTATCTTGCAGTGAGTGTTGTTGGTCATTAGCCAACCCCATCAGGTCCACAGCCTTAACACTGCCTCCTTCTATGTCAGGTTTTTCTGCATTAACTACTTTGGATTTAAGTTATTGCAATCTCACTGATTATTCAATTCCTCCTGATATCGATTGCCTATCATCATTGGAGAGACTAATCCTAAGTGGGAACAATTTTACACGCCTGCCTCACAACATTGCTAATCTTCCAAAGCTTTGTCTTCTTGAATTGGAAAATTGCCCACAGCTTCAGTCCTTACCGGTGCTTCCACCAAATAAACGCTTATATGTAGATTCAGATACAGTGGAGGTTAATTTGTTGGATCAAGAAAAGATATGGAAGTTGTTTAAATTAAGTGACCAAGTGCTCTCGCAGTCACCTGTATCTCAAATGCTTTATTGTCACCCCCGCACTCCTGTGTACATTAAAATCCCACCGCGATCTGATGCTGAGAATTTTTTTCCCGTGGACTCATCATTTGTGTCAAAACTTGATTCATTTGCATCAGTGACAGTTGGCATCCCAGAAGATTGTTATTCAAGTGATTGGTGGGGAGTTGCTGTTTTGGTGGCGTTAGATGCTGAAACTCCAGATGAAGATTCTATGGCCAAATACATGCACTTGTATTGGAGCTTTGACACTATGGATCCTGAAGATGGACCCTCGCTATCTCTGGCCTCAAGTTCAGAAGCAAATAATGACCTGTACCTGTTCACAATGGTAGTGAGTGATCACTTTATATACATTAGAGAACACCTAAGGACAGATCCAAAGTGGGCTCGGAAGTTCTTCAGCAAGCATCGAAAGCCAGAGTTGAAGGAAAAGAGTTTGGTGCGTTTTGAAGTGGATGTCGGAGGGTGCAAGATAAGCAAGTGTGGGTGGCGCGTGTTGCGTAAGGAAGATTGTCTTGAAGACTTTGAAAAATTCTACAGCGGCCAACATGGTAGGACGGGTGAATTCAAGGGAAAGGATGTTACTTCTCTGGAGGAGCAAACCACTGAAAGATCCAATGATAACAACTCGATGGTAAGCAGCGGCCAATATGTTGAGACTTGTTCTGATTCTGAGCATTCCGGTGGTCTGAGCAAACCAACTACGGATGAATTCAAGGGAGAGGATGTTACTGCTTCCGATAAGCGTAACATTGAAAGATCCAATCTTACATTGAAAGGGAAATTGTTTCAGAGTATTAGACAAGGACTTGGTTTAAGCATTTTAGCTTTGATGGCAACGATGGTAGGGACTACAGTATTCCTTTTGCCTAGGCAGGGTTTGGGATTTAAACAGCACATCGCAACAAATGAGGACACTGCTAAACTATCAAAATCACATTTGATTTCCCATGGAACTGCACTTCAGGTCAATACACCACAATTGCGGCAAAATCATAAAAAAAATTCAAGCACACGATTTTCTCTTTCAGTACTGCATCCACCAAGAACACTAGGTTTTTCTCAGAATCACTATCCTTACTTTACTAGACGAGGGGCATTATGCCCTTTATAG | 3903 | 0.3912 | MADYSQNSKWKYHVFLSFRGVDTRLAFTDHLYAALVRKSIITFRDDEELPRGEVISEKLGHAIEQSLSAIVIISKNYASSAWCLDELLKILQSKHLLGQQVFPIFYGVHPSDVRNQRGSIAEAFWKHEEKYNENKEKVQNWRDALREVANLSGWESKDQHETELIEEVVSQVWKKLELKFPAYNDGLVAIDTRLQDLFSTLKLGLEDVRFIGIWGMGGIGKTTLATALFKKIRSHFDVSCFIANVREASGERNQGLLQLQNKILSKLDIKGMVIDTLSEGKDSLRNLLSNKKVLLVLDDVSSKIHLENLAGNQEWFGQGSRIIVTTRDKHLLISHVVLFEMYESKILNRSESLQLFCEKAFKENKPKEDYLKLSQSVVEYAGGLPLALEVLGSFLCGRSLCDWKDALIKIKKVPHDDILDKLRISYDMLEDEHKTIFLDIACFFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIGMHDMLEEMGKTIVFQESPNDPGRRTRLWSLDDIDQVLRKNKGTEIVQGIVLNSSPSKPYKAHWDPEAFSRMCNMRFLIVLCDMHLPLGLKCLPSSLKVLVWWAYPLNALPLEVQLDELVHMQMINSKIRQLWNGTQCFGKLKVIDLSNSKYLRQTPNISGVPCLEELYLNDCTTLVEVHQSIGQHKKLMILHMMGCINLKTFPNKLEMCSLKTFYLSNCLTVQRLPDFGENMTSVSVLNLMNCKNLLGLPNSISNLKSLRVLNISGCSKVLHLPDNLNQNKALEDLDLSRTAITKLDPFLLQLGNLKRLSCSECCWSLANPIRSTALTLPPSMSGFSALTTLDLSYCNLTDYSIPPDIDCLSSLERLILSGNNFTRLPHNIANLPKLCLLELENCPQLQSLPVLPPNKRLYVDSDTVEVNLLDQEKIWKLFKLSDQVLSQSPVSQMLYCHPRTPVYIKIPPRSDAENFFPVDSSFVSKLDSFASVTVGIPEDCYSSDWWGVAVLVALDAETPDEDSMAKYMHLYWSFDTMDPEDGPSLSLASSSEANNDLYLFTMVVSDHFIYIREHLRTDPKWARKFFSKHRKPELKEKSLVRFEVDVGGCKISKCGWRVLRKEDCLEDFEKFYSGQHGRTGEFKGKDVTSLEEQTTERSNDNNSMVSSGQYVETCSDSEHSGGLSKPTTDEFKGEDVTASDKRNIERSNLTLKGKLFQSIRQGLGLSILALMATMVGTTVFLLPRQGLGFKQHIATNEDTAKLSKSHLISHGTALQVNTPQLRQNHKKNSSTRFSLSVLHPPRTLGFSQNHYPYFTRRGALCPL* | 1301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g3277 | 1300 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 7 | 625 | - | - | |
Lja2g3277 | 1300 | Gene3D | Ribonuclease Inhibitor | 807 | 888 | IPR032675 | - | |
Lja2g3277 | 1300 | Gene3D | Ribonuclease Inhibitor | 710 | 806 | IPR032675 | - | |
Lja2g3277 | 1300 | ProSiteProfiles | Leucine-rich repeat profile. | 847 | 869 | IPR001611 | GO:0005515 | |
Lja2g3277 | 1300 | ProSiteProfiles | TIR domain profile. | 10 | 176 | IPR000157 | GO:0007165 | |
Lja2g3277 | 1300 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 3 | 154 | IPR035897 | - | |
Lja2g3277 | 1300 | SMART | till_3 | 11 | 151 | IPR000157 | GO:0007165 | |
Lja2g3277 | 1300 | Gene3D | - | 5 | 175 | IPR035897 | - | |
Lja2g3277 | 1300 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 7 | 625 | IPR044974 | GO:0006952 | |
Lja2g3277 | 1300 | SUPERFAMILY | L domain-like | 552 | 932 | - | - | |
Lja2g3277 | 1300 | PRINTS | Disease resistance protein signature | 738 | 754 | - | - | |
Lja2g3277 | 1300 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Lja2g3277 | 1300 | PRINTS | Disease resistance protein signature | 287 | 301 | - | - | |
Lja2g3277 | 1300 | PRINTS | Disease resistance protein signature | 381 | 395 | - | - | |
Lja2g3277 | 1300 | SMART | AAA_5 | 207 | 347 | IPR003593 | - | |
Lja2g3277 | 1300 | Gene3D | - | 346 | 430 | IPR042197 | - | |
Lja2g3277 | 1300 | Gene3D | - | 176 | 337 | IPR027417 | - | |
Lja2g3277 | 1300 | SUPERFAMILY | "Winged helix" DNA-binding domain | 417 | 521 | IPR036390 | - | |
Lja2g3277 | 1300 | MobiDBLite | consensus disorder prediction | 1160 | 1176 | - | - | |
Lja2g3277 | 1300 | MobiDBLite | consensus disorder prediction | 1151 | 1176 | - | - | |
Lja2g3277 | 1300 | Pfam | TIR domain | 11 | 182 | IPR000157 | GO:0007165 | |
Lja2g3277 | 1300 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 809 | 886 | - | - | |
Lja2g3277 | 1300 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 690 | 780 | - | - | |
Lja2g3277 | 1300 | Gene3D | Ribonuclease Inhibitor | 520 | 709 | IPR032675 | - | |
Lja2g3277 | 1300 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 440 | IPR027417 | - | |
Lja2g3277 | 1300 | Pfam | NB-ARC domain | 206 | 411 | IPR002182 | GO:0043531 | |
Lja2g3277 | 1300 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 809 | 886 | IPR044974 | GO:0006952 | |
Lja2g3277 | 1300 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 690 | 780 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g3277 | Lja-Chr2 | 73308129 | 73314914 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja2g3277 | 7 | 793 | WRKY Transcription Factor Family | AT4G12020 | 30.889 | 1.18e-93 | 331 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g3277 | - | - | mtr:MTR_3g080470 | 1719.13 |