Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3274 ATGTCTTTTCCACGGTGTTGCTTTATATGTATTTTTATTCTTTTGGGTTTAGGTATAGAGCTAGCAAATTCTCAGCCTTATAGAGTAGTGGGAGGAAAACTACTACCTTACAAGACAATCATCGTGGATCAATCAGGGCATGGAAACTTCAAAACCATACAATCTGCTATTGATTCAATCCCTTCCAACAATAGGTATTGGGTTTCCATAAATGTGAAGACAGGTATCTACAGGGAAAAAGTGATCACAATTCCAGTTGACAAGCCTTACATCCTATTGCAAGGAGAGGGAAAGACGAAAACTCTTGTTCAATGGGGTGACCATGATAACACATTACAGAGCGCTACATTCACAACTTTGGCTGACAATATCATCATCAAGTTTATGAGTTTTATTAATTCTTACAAGAATTATAAACCCGTACGACCAGCAGTAGCTGCCTTGGTAAGCGGTGACAAGTCCTACTTCCCTAGTGTTGGTTTCTTTAGTTTTCAAGATACTTTGTGGGATAATCGTGGAACTCATTACTACAAGTCTTGTACCATTCAAGGTGCTGCTGATTTTATCTTTGGTGATGGTCAATCATTATACGAGGATTGTACCATATCTGTTATTGCTGCACCTCTAGGTCCAGGAATTTCTGGTTTTATCACAGCACAAGGGAGGGTAAGTCCCAGCCAATCAAGTGGATTTGTTTTTAAGAATTGTGTTATCGATGGAACTGGCACAACTTACTTGGGAAGACCGTGGAGAGAATATGCTAGAGTTCTTTTCTACCACACAAAAATGTCGAACATTATACATCCAAATCGTTGGGATCCAGGGCATTTCCGTAATCAAGTGTAA 846 0.3936 MSFPRCCFICIFILLGLGIELANSQPYRVVGGKLLPYKTIIVDQSGHGNFKTIQSAIDSIPSNNRYWVSINVKTGIYREKVITIPVDKPYILLQGEGKTKTLVQWGDHDNTLQSATFTTLADNIIIKFMSFINSYKNYKPVRPAVAALVSGDKSYFPSVGFFSFQDTLWDNRGTHYYKSCTIQGAADFIFGDGQSLYEDCTISVIAAPLGPGISGFITAQGRVSPSQSSGFVFKNCVIDGTGTTYLGRPWREYARVLFYHTKMSNIIHPNRWDPGHFRNQV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3274 281 PANTHER PECTINESTERASE 10-RELATED 21 277 - -
Lja2g3274 281 Pfam Pectinesterase 40 273 IPR000070 GO:0030599|GO:0042545
Lja2g3274 281 Gene3D - 36 280 IPR012334 -
Lja2g3274 281 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 277 - -
Lja2g3274 281 SUPERFAMILY Pectin lyase-like 36 275 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3274 Lja-Chr2 72978784 72998229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3274 38 280 Carbohydrate Esterase AT2G19150 48.178 1.62e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3274 - - gmx:100819252 350.517