Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3207 ATGTCAATGTCCTTTCTCACAAACTTGAACCGTGTTGAGACACTGCTCAATTCATCAAACACCTTGAGTGCACCAAATAAAAGATGGCACACTGCTTTTGTTACCATCTATTGTTCCCGTGCTCTTGTTTCACACTTCAATCTCAAGAAAAACAAACCAAAAATCTCACATTCCTCATCTTTCACCGTGCTAGATTTGGATGGTCCACCACAAAATCACAACCATTCCTTTGCCATTGATCAAGCAACTCTTAGTGACATTGTGAAGGAGAAAAACTTGCACAACCTTCAAAAACATGGTGGGGTTGATGGGGTTGCTTCAGCTCTTGAATCAAACATTGAGAGTGGTATCAATGGTGATGATGAAGGGGTTGCAATTGCACGTAGAAAACAAGTGTTTGGTTCCAACACTTACAAGAAACTACCTTCCAAAAATTTCTTACATTTTATAGTGGAAGCATTTAAGGATGTTACCATTCTTATTCTCTTGGTTTGTGCTGCTCTCTCTCTTGGTTTTGGAATCAAGGAGCATGGTGCAAAAGAAGGTTGGTATGATGGAGGAAGCATTTTCCTTGCTGTGTTCATTGTCATTGCATTGTCTTCTGTTAGCAACTTCAGGCAGAGCAGGCAATTTGACAAATTGTCTCAGGTGAGCAGTGATATTCAGATTGACGTGGTGAGAAATGAGCGCAGAGAGAAGATCTCAATCTTTGAGATTGTGGTTGGTGATGTTGTTTGCTTGAAGATTGGTGATCAAGTTCCAGCTGATGGGGTTTTCATAGATGGGCATTCACTGAGAGTTGATGAGTCAAGCATGACTGGGGAGAGTGATCATGTGGAGATTGATGGAAACCACCCTTTCTTGTTGTCTGGAACAAAAATTGCTGATGGGTATGGTAAGATGCTTGTTACCTCAGTTGGAATGAATACTACATGGGGTCAAATGATGAGTTCGATTAGTCGCGATGTCGACGAGCAAACCCCTTTGCAGGAGAGGCTGAACAAGCTCACATCATCTATTGGGAAGGTTGGTTTGGCTGTGGCTTTCTTAGTTCTTGTTGTTTTATTGGTTCGTTACTTCACAGGGAACACGGAGGATGAGAATGGGGTTAGAGAGTATAATGGAGGAGGAAGGAAGAGTAGTTTTGATGATATAATGAATGCAGTTGTGAGGATTGTTTCTGATGCAGTCACCATTGTTGTGGTTGCAATCCCTGAGGGTCTTCCACTTGCTGTGACACTGACATTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGGAAGCTCTCTGCTTGTGAGACAATGGGGTCTGCTACCACTATTTGCACTGACAAAACAGGCACACTCACCCTCAACCAGATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAGCCAATTGAAGAGGGTGGTTTTACAACAGTTGCTCCATTTGTTCTTCAACTGATCCAAGAAGGTGTGGCTCTCAACACAACTGGTGGGGTGCACAAGTCTAAATCAGGTTCTGAGTTTGAGTTTTCAGGTAGTCCCACTGAGAAAGCAATTTTATCATGGGCTGTGTTTGAATTGAACATGGAGATGGAGTACTTGGTTAAAAGCTGTTCTGTCATTCATGTCGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTCTTGTTGAGGAGGAATAATGCAAACAACAACAACACAGTTGATGCACATTGGAAAGGAGCAGCTGAGATGGTACTCAAAATGTGCTCAAGATACCATGATGCTTCCGGCATTGTGAAAGATCTTGACAATGAGAGTCGACTGAAATTTGAGCAAATTATCCAAGCTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTTGCACACTCAGAGGTTGCAGAAGAAGAGATTAGAGATGAAGAAGGCGTCACAAGGGTGAAAGAAAATGGTCTAACCCTGTTAGGACTTGTTGGTATTAAAGATCCATGTCGTCCCGGGGTGAAGGAAGCTGTGGAGGCTTGCCAACATGCTGGTGTGAATGTGAAAATGATCACAGGTGACAATGTTTTCACAGCAAAAGCTATAGCCACGGAATGTGGAATACTTCATCCTAATCAGGACACAGATGGAGCAATTGTTGAAGGGGAAGAATTTCGCAACTACACACATGAAGAGAGATTGGAAAAAGTGGAGAAAATATGTGTCATGGCAAGATCCTCTCCCTTTGATAAGCTTCTAATGGTTCAATACCTTAAACAGAAAGGCCATGTGGTTGCTGTCACTGGGGATGGAACAAATGATGCACCAGCCCTCAAGGAAGCTGATATTGGACTTTCTATGGGGATCCAAGGCACTGAAGTTGCCAAAGAGAGCTCAGATATTGTCATATTGGATGACAATTTTGCTACTGTGGTCACAGTCTTGAGGTGGGGGAGATGTGTCTATAACAACATCCAGAAGTTTATTCAATTTCAGTTGACAGTGAATGCTGCTGCACTTGTGATCAATTTTGTGGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACTGCAGTGCAATTGTTATGGGTGAACTTGATCATGGACACACTGGGTGCTTTGGCTCTTGCGACAGAGAAACCTACGAAGGAGTTAATGGAGAAATCACCAGTTGGTAGAACAAAACCTCTCATCACTAACATCATGTGGAGGAATCTTGCAGCTCAAGCTTTGTACCAGATAGTTATTCTGCTGACTCTTCAGTTTAAAGGTGAGTCTATCTTCAACACATTTGTTCTGTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGGAGAAGAATGTTTTCAAAGGCATACTCAGGAGTAAGCTGTTTTTGGGGATTGTTGGTTTCACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCAGATACTGAGAGGCTGAATTGGGGGCAATGGGGTCTTTGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGCTTGTGAAGTTGATACCTGTTCCTGATGAACCATTTCTCAATATTTTCAGAATTAGGAAGAAAAAATGA 3045 0.4266 MSMSFLTNLNRVETLLNSSNTLSAPNKRWHTAFVTIYCSRALVSHFNLKKNKPKISHSSSFTVLDLDGPPQNHNHSFAIDQATLSDIVKEKNLHNLQKHGGVDGVASALESNIESGINGDDEGVAIARRKQVFGSNTYKKLPSKNFLHFIVEAFKDVTILILLVCAALSLGFGIKEHGAKEGWYDGGSIFLAVFIVIALSSVSNFRQSRQFDKLSQVSSDIQIDVVRNERREKISIFEIVVGDVVCLKIGDQVPADGVFIDGHSLRVDESSMTGESDHVEIDGNHPFLLSGTKIADGYGKMLVTSVGMNTTWGQMMSSISRDVDEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTEDENGVREYNGGGRKSSFDDIMNAVVRIVSDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPIEEGGFTTVAPFVLQLIQEGVALNTTGGVHKSKSGSEFEFSGSPTEKAILSWAVFELNMEMEYLVKSCSVIHVETFNSKKKRSGVLLRRNNANNNNTVDAHWKGAAEMVLKMCSRYHDASGIVKDLDNESRLKFEQIIQAMAASSLRCIAFAHSEVAEEEIRDEEGVTRVKENGLTLLGLVGIKDPCRPGVKEAVEACQHAGVNVKMITGDNVFTAKAIATECGILHPNQDTDGAIVEGEEFRNYTHEERLEKVEKICVMARSSPFDKLLMVQYLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFATVVTVLRWGRCVYNNIQKFIQFQLTVNAAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMEKSPVGRTKPLITNIMWRNLAAQALYQIVILLTLQFKGESIFNTFVLCQVFNEFNARKMEEKNVFKGILRSKLFLGIVGFTIILQVVMVEFLKKFADTERLNWGQWGLCIGLAAVSWPIGWLVKLIPVPDEPFLNIFRIRKKK* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3207 1014 Pfam Cation transporting ATPase, C-terminus 839 997 IPR006068 -
Lja2g3207 1014 SFLD C1.7: P-type atpase like 428 807 - -
Lja2g3207 1014 CDD P-type_ATPase_Ca_PMCA-like 126 887 - -
Lja2g3207 1014 Gene3D - 126 320 - -
Lja2g3207 1014 PANTHER CALCIUM-TRANSPORTING ATPASE 11 986 - -
Lja2g3207 1014 SMART Cation_ATPase_N_a_2 92 174 IPR004014 -
Lja2g3207 1014 SFLD p-type atpase 428 807 IPR044492 -
Lja2g3207 1014 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 453 652 IPR023299 GO:0000166
Lja2g3207 1014 Gene3D - 443 799 IPR023214 -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 268 282 - -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 446 460 - -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Lja2g3207 1014 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Lja2g3207 1014 Pfam Cation transporter/ATPase, N-terminus 99 169 IPR004014 -
Lja2g3207 1014 Pfam E1-E2 ATPase 222 424 - -
Lja2g3207 1014 Pfam haloacid dehalogenase-like hydrolase 443 768 - -
Lja2g3207 1014 ProSitePatterns E1-E2 ATPases phosphorylation site. 448 454 IPR018303 -
Lja2g3207 1014 Gene3D - 152 902 - -
Lja2g3207 1014 Gene3D - 909 998 - -
Lja2g3207 1014 PANTHER CATION TRANSPORTING ATPASE 11 986 - -
Lja2g3207 1014 SUPERFAMILY HAD-like 444 859 IPR036412 -
Lja2g3207 1014 PRINTS H+-transporting ATPase (proton pump) signature 603 621 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g3207 1014 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g3207 1014 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g3207 1014 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 81 999 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lja2g3207 1014 SUPERFAMILY Calcium ATPase, transduction domain A 223 318 IPR008250 -
Lja2g3207 1014 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 389 467 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g3207 1014 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 726 835 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g3207 1014 Gene3D - 456 655 IPR023299 GO:0000166
Lja2g3207 1014 SUPERFAMILY Calcium ATPase, transmembrane domain M 99 999 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3207 Lja-Chr2 69369908 69372961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3207 12 1013 Primary Pumps ATPases AT3G22910 68.861 0.0 1322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3207 K01537 - gmx:100793918 1602.03