Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3201 ATGACAGAGCAACTTGGCATAAAGTTGGAGAAAGCAAGTATCATGTTACCAGGTGAGTACTGTTTGCATGAAGAAAACTCTAGCTGTAGCGAGATAGGGGATGAAGATTCAGAGTTAGATTCTGAGCTGTTTGAGATCAATATTAATTTGAAGGATCCTGAAGATACTTTAGATATAATTCCAGAAGACTGCGAGAGTATTAGTGTGTTCTCTCTTGATATAAATAATCACCTAGCTGAGAAATTAGATGTTGTTTATGTGGCGGTGGGCTTTGATGGAAATTCAAGTATGGAAGCGCTTTCATGGGCCTTGAAGCATGCCGTGACACCCTCCTCTACCACTGTGTGTCTTGTACACGTTTTCCCTCAAGTCAAGCTCATTCCAACTCCATTGGGAAAAATTCCAAGGAGCCATGTAAATGTAGAGCATGTTAACATCTGCTTAACCCTCGAGAAAGCAAAGAGAAAATTGCTTCTTCAAAAGTTCATTGGCCTGTGTGTTGACTCCAAGGTTAAGGTGGAGATAATGCTCATTGAAGCTGACAATGTTGCTAAAGCCATCTTGGACCTTGTCAGGAATCTCAATATAAGAAAATTGGTGATTGGAAATACCAAATCTAACTTAAGAAAATCTTGGTCTAGAAGGCAAAATGCAATAGCGGACATGGTACTGAAAAATGCAGAGGAAAGCTGTGATATTAAAATCATATGTGAAGGAAGAGAAGTGACCGACCAGATGATTGATTATTGCACTTCGCCACATTCAGAAGACAATGGCAATTACTGGAGTTTCTCATGGAGAAGAAGATGA 810 0.3975 MTEQLGIKLEKASIMLPGEYCLHEENSSCSEIGDEDSELDSELFEININLKDPEDTLDIIPEDCESISVFSLDINNHLAEKLDVVYVAVGFDGNSSMEALSWALKHAVTPSSTTVCLVHVFPQVKLIPTPLGKIPRSHVNVEHVNICLTLEKAKRKLLLQKFIGLCVDSKVKVEIMLIEADNVAKAILDLVRNLNIRKLVIGNTKSNLRKSWSRRQNAIADMVLKNAEESCDIKIICEGREVTDQMIDYCTSPHSEDNGNYWSFSWRRR* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3201 269 Gene3D HUPs 76 236 IPR014729 -
Lja2g3201 269 CDD STK_N 84 239 - -
Lja2g3201 269 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 29 260 - -
Lja2g3201 269 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 88 209 - -
Lja2g3201 269 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 29 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3201 Lja-Chr2 69051593 69052909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3201 65 243 U-box Gene Family AT5G65500 31.148 4.68e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3201 - - lja:Lj4g3v0096280.1 377.481