Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3180 ATGGCCTCACTCTCCGATCGCCGCCGTATGCTTCCGGCGAGCGACGCTGAGCCTCAGCTATCGGCAGAGACAGACTCCGTTTCTAACAACCACCGTGAGAAGCAGCGGCGAGTTGCCGGTAGAAACAGTCCTCGGCCTCGTCCTGTTCGGCAACGCTCTTTCAAGAGAGATTTCGAACGTGTCGCCGCAGAGACCTACTTGATTACTCGCCTCACCTTCACGCTTCTTCAATATCTCGGGATTGGTTACCGTTGGATCACGAAAGTACTTGCCCTTGGATGTTATGCCATGCTACTTATGCCTGGTTTTCTGCAAGTTGCATATTACTATTTCTTCTCAAGTAAGGTAAAACGAAGCATTGTTTATGGAGATCAGCCTAGAAACAGGTTGGATCTGTATCTACCATCTGAAATCAGTGAACCTAAGCCAGTTTTGATATTTGTAACTGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGACTACAGTTGGCAGAGAGAGACATTATAGTGGCATGCGTCGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGACACCTCTCAGGGAATTTCATTCATCATCAACAACATAGCTAACTATGGAGGCGACCCTAATAGGATTTATCTAATGGGGCAATCTGCTGGTGCGCATATTTCGTCTTGTGCTTTACTGAACCAAGCAACAAGAGAATCTCGAAAAGAAGACGGTGTGTCTTGGAGTATTTCCCAAATAAAAGCTTATTTTGGTTTATCTGGAGGATACAATTTATTGGATTTAGTCGATCACTTTGACAATCGTGGCTTGTATCGTTCCATTTTTTTAAGCATAATGGAAGGTGAAGAGTCTTTGAAGGAATTTTCGCCTGAAATCAAAATTCAAGATCCGTGTATCAAGGATTCCATTCCTCTCCTGCCCCCTATAATTCTTTTTCATGGAACTGGTGATTATTCCATACCGTCAATTGCCAGTGAACGGTTTGCCGATGCTCTTAAGAAGGCAGGGGCAAGAGCTGACCTGATTCTGTATGATGGGAAAACACATACGGATTTGTTTCTACAAGATCCACTCCGAGGTGGTAAAGATGATCTATTTGATCATGTGGTTGCTTTCGTACATGCCAATGATAATGATGCCCTTGCAAAAGATGCAACTGCACCCCCAAGAAGACGGTTTGTTCCTGAAATTTTATTGAAGTTGGCTCGCAAGATCAGCCCCTTCTAA 1248 0.4423 MASLSDRRRMLPASDAEPQLSAETDSVSNNHREKQRRVAGRNSPRPRPVRQRSFKRDFERVAAETYLITRLTFTLLQYLGIGYRWITKVLALGCYAMLLMPGFLQVAYYYFFSSKVKRSIVYGDQPRNRLDLYLPSEISEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERDIIVACVDYRNFPQGTISDMVNDTSQGISFIINNIANYGGDPNRIYLMGQSAGAHISSCALLNQATRESRKEDGVSWSISQIKAYFGLSGGYNLLDLVDHFDNRGLYRSIFLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKKAGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFVPEILLKLARKISPF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3180 415 Pfam BD-FAE 130 339 - -
Lja2g3180 415 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 33 406 - -
Lja2g3180 415 MobiDBLite consensus disorder prediction 1 52 - -
Lja2g3180 415 Gene3D alpha/beta hydrolase 111 364 IPR029058 -
Lja2g3180 415 SUPERFAMILY alpha/beta-Hydrolases 108 387 IPR029058 -
Lja2g3180 415 PANTHER ARYLACETAMIDE DEACETYLASE 33 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3180 Lja-Chr2 68263504 68271270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3180 50 415 Carbohydrate Esterase AT1G26120 68.033 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g3180 K15889 - gmx:100788814 688.337